RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 B3GNTL1Q67FW5 361 aaPredicted RBP12.71□□□□□ -0.37
USF1-206ENST00000491629 SHISA6Q6ZSJ9 500 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.71□□□□□ -0.37
USF1-206ENST00000491629 HAUS1Q96CS2 278 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 DCUN1D1Q96GG9 259 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 LURAP1Q96LR2 239 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 AGAP4Q96P64 663 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 QKIQ96PU8 341 aaKnown RBP eCLIP12.71□□□□□ -0.37
USF1-206ENST00000491629 COPS8Q99627 209 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 TRIM56Q9BRZ2 755 aaKnown RBP12.71□□□□□ -0.37
USF1-206ENST00000491629 PLAGL1Q9UM63 463 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 PRSS21Q9Y6M0 314 aa12.71□□□□□ -0.37
USF1-206ENST00000491629 MAP1AP78559 2803 aaPredicted RBP12.71□□□□□ -0.37
USF1-206ENST00000491629 SPG11Q96JI7 2443 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
USF1-206ENST00000491629 A0A1B0GUH1 482 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 C5orf60A6NFR6 353 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 C2orf81A6NN90 581 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 IFRD1O00458 451 aaPredicted RBP12.7□□□□□ -0.38
USF1-206ENST00000491629 MAP3K7O43318 606 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 WISP2O76076 250 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 MED26O95402 600 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 CD63P08962 238 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 MCM3P25205 808 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 ARHGAP25P42331 645 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 RPA4Q13156 261 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 ART3Q13508 389 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
USF1-206ENST00000491629 KAZNQ674X7 775 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 TLDC1Q6P9B6 456 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 NAPRTQ6XQN6 538 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 LINC00696Q6ZRV3 163 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 TTLL10Q6ZVT0 673 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 OVCH1Q7RTY7 1134 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 SNX20Q7Z614 316 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 PIANPQ8IYJ0 282 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 AMER2Q8N7J2 671 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 OR11G2Q8NGC1 345 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 N4BP2L2Q92802 583 aaPredicted RBP12.7□□□□□ -0.38
USF1-206ENST00000491629 NACC2Q96BF6 587 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 VAT1Q99536 393 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 FSD1LQ9BXM9 530 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 LHPPQ9H008 270 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 GBA3Q9H227 469 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 SLC26A1Q9H2B4 701 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 TXLNGQ9NUQ3 528 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 ZDHHC3Q9NYG2 299 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 EURLQ9NYK6 297 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 RSPH14Q9UHP6 348 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
USF1-206ENST00000491629 hCG_1818297A0A087WSY0 165 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 HEATR9A2RTY3 570 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 PCDH17O14917 1159 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 SNRPB2P08579 225 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 RALBP11234 206 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 MAGP20916 626 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 COMTP21964 271 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 ALAS2P22557 587 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 ACRV1P26436 265 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 RBL1P28749 1068 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 MARCKSL1P49006 195 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 TFDP2Q14188 446 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 TLR1Q15399 786 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 ZXDCQ2QGD7 858 aaPredicted RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 RPUSD3Q6P087 351 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 BZW1Q7L1Q6 419 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 SERPINA9Q86WD7 417 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 ZNF295-AS1Q8N0V1 137 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 PSMF1Q92530 271 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 FKBP10Q96AY3 582 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 ULK4Q96C45 1275 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 CCDC120Q96HB5 630 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 DNAJC1Q96KC8 554 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 TRIM8Q9BZR9 551 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 GOLPH3Q9H4A6 298 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 SOX17Q9H6I2 414 aaPredicted RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 WDR54Q9H977 334 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 OLAHQ9NV23 265 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 DDX56Q9NY93 547 aaKnown RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 PLCL2Q9UPR0 1127 aa12.69□□□□□ -0.38
USF1-206ENST00000491629 KLF2Q9Y5W3 355 aaPredicted RBP12.69□□□□□ -0.38
USF1-206ENST00000491629 ITGALP20701 1170 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 PSMB4P28070 264 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 MC4RP32245 332 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 SHMT2P34897 504 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 TNNT3P45378 269 aaPredicted RBP12.68□□□□□ -0.38
USF1-206ENST00000491629 GEMP55040 296 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 UBASH3AP57075 661 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 MFAP5Q13361 173 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 SPARCL1Q14515 664 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 BRD3Q15059 726 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 DBN1Q16643 649 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 SLC5A12Q1EHB4 618 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 FCRL6Q6DN72 434 aa12.68□□□□□ -0.38
USF1-206ENST00000491629 FAM180AQ6UWF9 173 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms