RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 BZW1Q7L1Q6 419 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ASRGL1Q7L266 308 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SPATA21Q7Z572 469 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SYT12Q8IV01 421 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 MAML2Q8IZL2 1156 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RIBC1Q8N443 379 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 DCLK2Q8N568 766 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 FITM2Q8N6M3 262 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 PCDH20Q8N6Y1 951 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CCDC185Q8N715 623 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 NIPA2Q8N8Q9 360 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RTL3Q8N8U3 475 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CADM4Q8NFZ8 388 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 DYDC1Q8WWB3 177 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SORCS1Q8WY21 1168 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SNX19Q92543 992 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ARHGEF2Q92974 986 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 IGSF8Q969P0 613 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ISG20Q96AZ6 181 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SNF8Q96H20 258 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 LRIG1Q96JA1 1093 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ZC3H10Q96K80 434 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 MAGEB18Q96M61 343 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ACOX2Q99424 681 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SMAD5Q99717 465 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CCDC77Q9BR77 488 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RTKNQ9BST9 563 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CALN1Q9BXU9 219 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 TRIM7Q9C029 511 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RSPH9Q9H1X1 276 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 TMEM245Q9H330 911 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CDC42EP4Q9H3Q1 356 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ITM2CQ9NQX7 267 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 VPS45Q9NRW7 570 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 TMEM248Q9NWD8 314 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 FBXL12Q9NXK8 326 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RCOR3Q9P2K3 495 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 ING1Q9UK53 422 aaPredicted RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 FZD4Q9ULV1 537 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 FZD10Q9ULW2 581 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RUVBL1Q9Y265 456 aaKnown RBP4.68□□□□□ -1.66
CSTF1-205ENST00000490539 HS3ST2Q9Y278 367 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 C15orf41Q9Y2V0 281 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 RAD54BQ9Y620 910 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 POLQO75417 2590 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 SDK1Q7Z5N4 2213 aa4.68□□□□□ -1.66
CSTF1-205ENST00000490539 CREBBPQ92793 2442 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 NAV3Q8IVL0 2385 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TCRBV5S1A1TA0A578 114 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TCRBV7S2A1N4TA0A589 114 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 FAM47DPA6NHR8 397 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TMEM200CA6NKL6 621 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TTC34A8MYJ7 566 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 DFFAO00273 331 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MCF2LO15068 1137 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TP73O15350 636 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SLC7A4O43246 635 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 KDELR3O43731 214 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MAGEC1O60732 1142 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CDH16O75309 829 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 LRCH4O75427 683 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ZNF189O75820 626 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CNTN5O94779 1100 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PROSCO94903 275 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ANP32DO95626 131 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 POP4O95707 220 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SEMA4FO95754 770 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 GAS8O95995 478 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CFIP05156 583 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ABHD2P08910 425 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TDGF1P13385 188 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 HLA-EP13747 358 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 GOT1P17174 413 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CA4P22748 312 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PRKCHP24723 683 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 GJC1P36383 396 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MPLP40238 635 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MSH2P43246 934 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SLCO1A2P46721 670 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 KCNJ1P48048 391 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 PSMD8P48556 350 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SERPINH1P50454 418 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TPMTP51580 245 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 SLC18A1P54219 525 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CDH6P55285 790 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CTXN1P60606 82 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RHOAP61586 193 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 POLR2LP62875 67 aaKnown RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 KCNJ2P63252 427 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ZNF33AQ06730 810 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 MTM1Q13496 603 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ENPP2Q13822 863 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 TFDP2Q14188 446 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 ZNF235Q14590 738 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RFTN1Q14699 578 aaPredicted RBP4.67□□□□□ -1.66
CSTF1-205ENST00000490539 RAB39AQ14964 217 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 CSRP2Q16527 193 aa4.67□□□□□ -1.66
CSTF1-205ENST00000490539 DPYSL2Q16555 572 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms