RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 FAM213AQ9BRX8 229 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TMEM79Q9BSE2 394 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CNPY3Q9BT09 278 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 EFHD1Q9BUP0 239 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ADI1Q9BV57 179 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 GATA5Q9BWX5 397 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SEZ6LQ9BYH1 1024 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SHCBP1LQ9BZQ2 653 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 WDR12Q9GZL7 423 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 DNAI2Q9GZS0 605 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 PAIP1Q9H074 479 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CDT1Q9H211 546 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MUC13Q9H3R2 512 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ARMC7Q9H6L4 198 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 RMND5AQ9H871 391 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 POLR1BQ9H9Y6 1135 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 EFCAB1Q9HAE3 211 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 MOV10Q9HCE1 1003 aaKnown RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TCF7L1Q9HCS4 588 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 VTA1Q9NP79 307 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SPAG4Q9NPE6 437 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 KMT5AQ9NQR1 393 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TLR9Q9NR96 1032 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CCM2LQ9NUG4 571 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SMOXQ9NWM0 555 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 TMEM216Q9P0N5 145 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ABCD2Q9UBJ2 740 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 POLG2Q9UHN1 485 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 CYTH4Q9UIA0 394 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 USP18Q9UMW8 372 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ERVK-11Q9UQG0 969 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP11BQ9Y2G3 1177 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC45A1Q9Y2W3 748 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 IFT52Q9Y366 437 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 IPPQ9Y573 584 aa3.41□□□□□ -1.86
CRNKL1-203ENST00000490258 KIAA1549LQ6ZVL6 1849 aa3.4□□□□□ -1.86
CRNKL1-203ENST00000490258 IGKV6D-21A0A0A0MT36 114 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 A0A1W2PR48 441 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PRORSD1PA6NEY8 169 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ASB14A6NK59 587 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 C2CD4BA6NLJ0 364 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 BBIP1A8MTZ0 92 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 HACD1B0YJ81 288 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 CLDN25C9JDP6 229 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 E7ENX8 843 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 TMX2-CTNND1H3BSU7 103 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 STX16-NPEPL1H3BU86 382 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 J3QRK9 145 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 SOCS2O14508 198 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 SDHDO14521 159 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 APOL1O14791 398 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 AIM2O14862 343 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 LSM1O15116 133 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ACOX3O15254 700 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MSI1O43347 362 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MED7O43513 233 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 XPOTO43592 962 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PIP5K1CO60331 668 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 TSPAN1O60635 241 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 CABYRO75952 493 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 STC2O76061 302 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 TOX4O94842 621 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GABARAPO95166 117 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 IL18RAPO95256 599 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 METTL18O95568 372 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 STAMBPO95630 424 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GPIP06744 558 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GNAO1P09471 354 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 SBK3P0C264 359 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MBL2P11226 248 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 FCGR1AP12314 374 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 P4HA1P13674 534 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 HSD17B1P14061 328 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 AKR1A1P14550 325 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ZNF182P17025 639 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ARF4P18085 180 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 CCNA2P20248 432 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ATP6V1B2P21281 511 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ACVR2AP27037 513 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GSTM2P28161 218 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 CYP2C18P33260 490 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 HPCAL1P37235 193 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 CAPGP40121 348 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GARSP41250 739 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GRIA3P42263 894 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 LEPRP48357 1165 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GSSP48637 474 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 POLD2P49005 469 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 NR2C2P49116 596 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MRPL19P49406 292 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 RPL14P50914 215 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 SCNN1GP51170 649 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PTTG1IPP53801 180 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 MANFP55145 182 aaKnown RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 PKNOX1P55347 436 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 SESN2P58004 480 aaPredicted RBP3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 DNAJB13P59910 316 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 GABARAPL2P60520 117 aa3.4□□□□□ -1.87
CRNKL1-203ENST00000490258 ADARB1P78563 741 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms