RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 GEMIN8Q9NWZ8 242 aaKnown RBP17.24■□□□□ 0.35
ABCF3-217ENST00000489719 ASIC3Q9UHC3 531 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 PCDHGA6Q9Y5G7 932 aa17.24■□□□□ 0.35
ABCF3-217ENST00000489719 A0A0J9YY10 115 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 E7EQ34 232 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 CREG1O75629 220 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 CD9P21926 228 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 ADARP55265 1226 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 ITGA1P56199 1179 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 NFATC3Q12968 1075 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 CDHR3Q6ZTQ4 885 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 TMEM135Q86UB9 458 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 TRIM73Q86UV7 250 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 CILP2Q8IUL8 1156 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 C2orf73Q8N5S3 287 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 C19orf47Q8N9M1 422 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 OR1L3Q8NH93 324 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 MAGEC3Q8TD91 643 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 APOBEC4Q8WW27 367 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 RAD51AP1Q96B01 352 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 PDLIM2Q96JY6 352 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 LRFN5Q96NI6 719 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 FAM117AQ9C073 453 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 TWSG1Q9GZX9 223 aa17.23■□□□□ 0.35
ABCF3-217ENST00000489719 DDX47Q9H0S4 455 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 AKIRIN1Q9H9L7 192 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 INTS10Q9NVR2 710 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 FARSAQ9Y285 508 aaKnown RBP17.23■□□□□ 0.35
ABCF3-217ENST00000489719 USP27XA6NNY8 438 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 E5RI56 91 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 MEN1O00255 615 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 TERTO14746 1132 aaKnown RBP17.22■□□□□ 0.35
ABCF3-217ENST00000489719 RECKO95980 971 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 HBQ1P09105 142 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
ABCF3-217ENST00000489719 PKLRP30613 574 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 POLE2P56282 527 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 SLC5A12Q1EHB4 618 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CTSL3PQ5NE16 218 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 PRAMEF17Q5VTA0 474 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 ZNF470Q6ECI4 717 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CENPUQ71F23 418 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 SLC38A9Q8NBW4 561 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CALML6Q8TD86 181 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 SEC14L1Q92503 715 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CAPZA3Q96KX2 299 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 SIGLEC10Q96LC7 697 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 TRIM56Q9BRZ2 755 aaKnown RBP17.22■□□□□ 0.35
ABCF3-217ENST00000489719 RAB11FIP5Q9BXF6 653 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CCDC68Q9H2F9 335 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 C20orf96Q9NUD7 363 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-217ENST00000489719 IL1RAPL1Q9NZN1 696 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CIDEBQ9UHD4 219 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 PCYOX1Q9UHG3 505 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 HEMK1Q9Y5R4 338 aaPredicted RBP17.22■□□□□ 0.35
ABCF3-217ENST00000489719 SAR1BQ9Y6B6 198 aa17.22■□□□□ 0.35
ABCF3-217ENST00000489719 CDC14CA4D256 554 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 RASGRF2O14827 1237 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 NIPSNAP2O75323 286 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 USP1O94782 785 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 S1PR4O95977 384 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 PTPN4P29074 926 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 CCNFP41002 786 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 GPS2Q13227 327 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 KCNAB2Q13303 367 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 SF1Q15637 639 aaKnown RBP17.21■□□□□ 0.35
ABCF3-217ENST00000489719 LONRF1Q17RB8 773 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 RNASEH2BQ5TBB1 312 aaKnown RBP17.21■□□□□ 0.35
ABCF3-217ENST00000489719 ATP1A1-AS1Q5TC04 95 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 PAPD7Q5XG87 772 aaKnown RBP17.21■□□□□ 0.35
ABCF3-217ENST00000489719 LMNTD2Q8IXW0 634 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 OR2L8Q8NGY9 312 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 FAM136AQ96C01 138 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 RUNDC3BQ96NL0 473 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 IL17FQ96PD4 163 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 NAPGQ99747 312 aaPredicted RBP17.21■□□□□ 0.35
ABCF3-217ENST00000489719 CHRNA10Q9GZZ6 450 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 SLC25A18Q9H1K4 315 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 CHST8Q9H2A9 424 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 ACTL8Q9H568 366 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 FAM60AQ9NP50 221 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 INTS7Q9NVH2 962 aaKnown RBP17.21■□□□□ 0.35
ABCF3-217ENST00000489719 IRAK4Q9NWZ3 460 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 POLHQ9Y253 713 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 AP1M2Q9Y6Q5 423 aa17.21■□□□□ 0.35
ABCF3-217ENST00000489719 SMG1Q96Q15 3661 aaKnown RBP17.2■□□□□ 0.34
ABCF3-217ENST00000489719 ZCWPW2A0A1B0GU75 182 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 DNALI1O14645 258 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-217ENST00000489719 ZNF749O43361 778 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 OR2B3O76000 313 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 C1orf105O95561 183 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 AGXTP21549 392 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 MAGEA3P43357 314 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 CTBP1Q13363 440 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 PTK6Q13882 451 aa17.2■□□□□ 0.34
ABCF3-217ENST00000489719 ZIC1Q15915 447 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms