RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 PRDX3P30048 256 aaKnown RBP21.06■□□□□ 0.96
SMC4-221ENST00000489573 CCNG1P51959 295 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 CTBSQ01459 385 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SLC9B1Q4ZJI4 515 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 SNX31Q8N9S9 440 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 PHC3Q8NDX5 983 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 OR5K2Q8NHB8 316 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 C12orf66Q96MD2 445 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 TRIT1Q9H3H1 467 aaKnown RBP21.06■□□□□ 0.96
SMC4-221ENST00000489573 DNAJC11Q9NVH1 559 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 TRNAU1APQ9NX07 287 aaKnown RBP21.06■□□□□ 0.96
SMC4-221ENST00000489573 ZNF225Q9UK10 706 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 ST14Q9Y5Y6 855 aa21.06■□□□□ 0.96
SMC4-221ENST00000489573 TNFRSF10AO00220 468 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 HGSO14964 777 aaPredicted RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 JUNP05412 331 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 ARL1P40616 181 aaPredicted RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 FOXA1P55317 472 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 BTKQ06187 659 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 TRAF3Q13114 568 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 EIF2B5Q13144 721 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 FZD2Q14332 565 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 UAP1L1Q3KQV9 507 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 TSSK4Q6SA08 328 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 ALYREFQ86V81 257 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 DCP2Q8IU60 420 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 TBC1D21Q8IYX1 336 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 MFSD2AQ8NA29 543 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 OR56A3Q8NH54 315 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 SKA1Q96BD8 255 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 PYCR2Q96C36 320 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 LRRC37BQ96QE4 947 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 KCNA7Q96RP8 456 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 INSM2Q96T92 566 aaPredicted RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 NUSAP1Q9BXS6 441 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 TMEM168Q9H0V1 697 aa21.05■□□□□ 0.96
SMC4-221ENST00000489573 CFAP20Q9Y6A4 193 aaKnown RBP21.05■□□□□ 0.96
SMC4-221ENST00000489573 OR4F21O95013 312 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 UROSP10746 265 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 ITPKAP23677 461 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 CD38P28907 300 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 INHBCP55103 352 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 ERVPABLB-1P60509 514 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 RACK1P63244 317 aaKnown RBP21.04■□□□□ 0.96
SMC4-221ENST00000489573 TUBB3Q13509 450 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 NAE1Q13564 534 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 UGT3A2Q3SY77 523 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 LETMD1Q6P1Q0 360 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 ACAD11Q709F0 780 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 EFL1Q7Z2Z2 1120 aaKnown RBP21.04■□□□□ 0.96
SMC4-221ENST00000489573 OR4F6Q8NGB9 312 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 ZNF480Q8WV37 535 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 PPP1R36Q96LQ0 422 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 CDK15Q96Q40 435 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 PRDM8Q9NQV8 689 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 SLC22A14Q9Y267 594 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 DNAJC15Q9Y5T4 150 aa21.04■□□□□ 0.96
SMC4-221ENST00000489573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 A0A1W2PR77 199 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 TMEM221A6NGB7 291 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 M0R296 226 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 LAMTOR5O43504 91 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 TDGF1P13385 188 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 AK4P27144 223 aaPredicted RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 MAOBP27338 520 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 FNTBP49356 437 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 GRB7Q14451 532 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 CLCA4Q14CN2 919 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 FAM219BQ5XKK7 198 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 DUS1LQ6P1R4 473 aaKnown RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 WASH2PQ6VEQ5 465 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 MILR1Q7Z6M3 343 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 MTDHQ86UE4 582 aaKnown RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 IQCHQ86VS3 1027 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 WDR5BQ86VZ2 330 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 PARGQ86W56 976 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 SYTL1Q8IYJ3 562 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 TMEFF1Q8IYR6 380 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 FITM2Q8N6M3 262 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 DCBLD1Q8N8Z6 715 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 TWIST2Q8WVJ9 160 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 MED8Q96G25 268 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 NTMT1Q9BV86 223 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 MIR1-1HGQ9H1L0 117 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 DUSP15Q9H1R2 295 aaPredicted RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 WDR55Q9H6Y2 383 aaPredicted RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 MEAF6Q9HAF1 191 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 WASH6PQ9NQA3 447 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 TCF7L2Q9NQB0 619 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 IMP3Q9NV31 184 aaKnown RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 TDRKHQ9Y2W6 561 aaKnown RBP21.03■□□□□ 0.96
SMC4-221ENST00000489573 LRP4O75096 1905 aa21.03■□□□□ 0.96
SMC4-221ENST00000489573 GOLGA8QA0A0J9YX86 632 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 GOLGA8OA6NCC3 632 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 GOLGA8NF8WBI6 632 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 SDHDO14521 159 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 CHEK2O96017 543 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 WNT1P04628 370 aa21.02■□□□□ 0.96
SMC4-221ENST00000489573 ENO1P06733 434 aaKnown RBP21.02■□□□□ 0.96
SMC4-221ENST00000489573 EBLN1P0CF75 366 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms