RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 ALOX15P16050 662 aaPredicted RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 ARFIP2P53365 341 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 AQP5P55064 265 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SRSF5Q13243 272 aaKnown RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 PMS2CLQ68D20 193 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SLC30A9Q6PML9 568 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 ABRAXAS1Q6UWZ7 409 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SPATS2Q86XZ4 545 aaKnown RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 NRROSQ86YC3 692 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 KLHDC8AQ8IYD2 350 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 GPBAR1Q8TDU6 330 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 SKA1Q96BD8 255 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 FAR2Q96K12 515 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 FERD3LQ96RJ6 166 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 ZNF382Q96SR6 550 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 TMEM120AQ9BXJ8 343 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 GSDMCQ9BYG8 508 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 NOL11Q9H8H0 719 aaKnown RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 TNFRSF12AQ9NP84 129 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 IMP3Q9NV31 184 aaKnown RBP20.3■□□□□ 0.84
SND1-214ENST00000489417 KCNK4Q9NYG8 393 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 PCOLCE2Q9UKZ9 415 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 CEP192Q8TEP8 1941 aa20.3■□□□□ 0.84
SND1-214ENST00000489417 TMEM233B4DJY2 109 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 MATN2O00339 956 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 BCAT2O15382 392 aaPredicted RBP20.29■□□□□ 0.84
SND1-214ENST00000489417 CTSEP14091 401 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 EPB42P16452 691 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 PKNOX1P55347 436 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 NXPH1P58417 271 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 GRB7Q14451 532 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 RPE65Q16518 533 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 LYSMD4Q5XG99 296 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 GPRIN3Q6ZVF9 776 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 BMP8AQ7Z5Y6 402 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 SYVN1Q86TM6 617 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 ANKS4BQ8N8V4 417 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 SNX31Q8N9S9 440 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 OR56A3Q8NH54 315 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 ZNF480Q8WV37 535 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 PYCR2Q96C36 320 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 MVB12BQ9H7P6 319 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 CAAP1Q9H8G2 361 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 IPPKQ9H8X2 491 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 DNAJC11Q9NVH1 559 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 DNAJC28Q9NX36 388 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 SCHIP1Q9P0W5 487 aaPredicted RBP20.29■□□□□ 0.84
SND1-214ENST00000489417 VTI1BQ9UEU0 232 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 TDRKHQ9Y2W6 561 aaKnown RBP20.29■□□□□ 0.84
SND1-214ENST00000489417 TRAF6Q9Y4K3 522 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 HEBP2Q9Y5Z4 205 aa20.29■□□□□ 0.84
SND1-214ENST00000489417 OR7A17O14581 309 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 ZNF195O14628 629 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 GIPC1O14908 333 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 VILLO15195 856 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 HDAC3O15379 428 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 ESRRBO95718 433 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 OTCP00480 354 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 FGF4P08620 206 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 MTHFD1P11586 935 aaKnown RBP20.28■□□□□ 0.84
SND1-214ENST00000489417 JUNDP17535 347 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 DHPSP49366 369 aaPredicted RBP20.28■□□□□ 0.84
SND1-214ENST00000489417 PRKG2Q13237 762 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 NAE1Q13564 534 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 MAVSQ7Z434 540 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 CLYBLQ8N0X4 340 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 ATP6V1E2Q96A05 226 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 SPATA7Q9P0W8 599 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 APOBEC3BQ9UH17 382 aaKnown RBP20.28■□□□□ 0.84
SND1-214ENST00000489417 FIS1Q9Y3D6 152 aa20.28■□□□□ 0.84
SND1-214ENST00000489417 A0A1B0GTL3 188 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 A6NCN8 305 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 OR52A4PA6NMU1 304 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 AZIN1O14977 448 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 KATNA1O75449 491 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 EML2O95834 649 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 CSF2P04141 144 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 ITPKAP23677 461 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 CSNK1EP49674 416 aaKnown RBP20.27■□□□□ 0.84
SND1-214ENST00000489417 AFF3P51826 1226 aaKnown RBP20.27■□□□□ 0.84
SND1-214ENST00000489417 CCNG1P51959 295 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 PNLIPRP1P54315 467 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 KRT33BQ14525 404 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 SYTL1Q8IYJ3 562 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 OR52B6Q8NGF0 335 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 MED8Q96G25 268 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 PLCD4Q9BRC7 762 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 STN1Q9H668 368 aaKnown RBP20.27■□□□□ 0.84
SND1-214ENST00000489417 POLG2Q9UHN1 485 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 PLAGL1Q9UM63 463 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 SLC22A14Q9Y267 594 aa20.27■□□□□ 0.84
SND1-214ENST00000489417 CRCPO75575 148 aa20.27■□□□□ 0.83
SND1-214ENST00000489417 F3P13726 295 aa20.27■□□□□ 0.83
SND1-214ENST00000489417 NME1P15531 152 aaKnown RBP20.27■□□□□ 0.83
SND1-214ENST00000489417 PRDX3P30048 256 aaKnown RBP20.27■□□□□ 0.83
SND1-214ENST00000489417 HSD17B2P37059 387 aa20.27■□□□□ 0.83
SND1-214ENST00000489417 ARL1P40616 181 aaPredicted RBP20.27■□□□□ 0.83
SND1-214ENST00000489417 C21orf59P57076 290 aa20.27■□□□□ 0.83
SND1-214ENST00000489417 ERVPABLB-1P60509 514 aa20.27■□□□□ 0.83
SND1-214ENST00000489417 TRAF3Q13114 568 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms