RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 EIF5P55010 431 aaKnown RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 CUL4AQ13619 759 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SQLEQ14534 574 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 TEAD2Q15562 447 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 XKR6Q5GH73 641 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SLC25A53Q5H9E4 307 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 IL27RAQ6UWB1 636 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 TMPRSS11BQ86T26 416 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 ZNF614Q8N883 585 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 DYRK2Q92630 601 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 ZNF622Q969S3 477 aaKnown RBP eCLIP3.19□□□□□ -1.9
RFC4-213ENST00000489028 MOCOSQ96EN8 888 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 C18orf12Q96KH6 178 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SYT11Q9BT88 431 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 NUP85Q9BW27 656 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SHARPINQ9H0F6 387 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 TMX4Q9H1E5 349 aaPredicted RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 PDE7BQ9NP56 450 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SLC35C2Q9NQQ7 365 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 SERINC1Q9NRX5 453 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 PAK5Q9P286 719 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 CRNNQ9UBG3 495 aaPredicted RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 CACNG4Q9UBN1 327 aa3.19□□□□□ -1.9
RFC4-213ENST00000489028 FBXO2Q9UK22 296 aaPredicted RBP3.19□□□□□ -1.9
RFC4-213ENST00000489028 A0A0J9YWU9 116 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 ANKRD18BA2A2Z9 1011 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 A8MV72 311 aaPredicted RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 H7C423 109 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 TSPAN9O75954 239 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 GFPT2O94808 682 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 SORBS2O94875 1100 aaKnown RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 DUS4LO95620 317 aaKnown RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 CLDN1O95832 211 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 GJA1P17302 382 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 TYMPP19971 482 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 CA6P23280 308 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 ACTN2P35609 894 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 NAP1L1P55209 391 aaKnown RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 ZNF415Q09FC8 603 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 TAF13Q15543 124 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 NTRK2Q16620 822 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 UGP2Q16851 508 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 CTU2Q2VPK5 515 aaKnown RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 KRT71Q3SY84 523 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 RILPL1Q5EBL4 403 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 RTN4RL2Q86UN3 420 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 TMEM173Q86WV6 379 aaPredicted RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 LACC1Q8IV20 430 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 MINDY1Q8N5J2 469 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 PPFIBP2Q8ND30 876 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 PHLDA1Q8WV24 401 aaPredicted RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 PRPF31Q8WWY3 499 aaKnown RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 SUSD6Q92537 303 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 ANKRD9Q96BM1 317 aaPredicted RBP3.18□□□□□ -1.9
RFC4-213ENST00000489028 MS4A10Q96PG2 267 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 EGFL8Q99944 293 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 VGLL1Q99990 258 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 PIGQQ9BRB3 760 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 CABLES2Q9BTV7 478 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 MXD3Q9BW11 206 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 TEX12Q9BXU0 123 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 EQTNQ9NQ60 294 aa3.18□□□□□ -1.9
RFC4-213ENST00000489028 IGKV3D-20A0A0C4DH25 116 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 ZNF195O14628 629 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 KLF11O14901 512 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 AHCYL1O43865 530 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 SMIM18P0DKX4 95 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 HSPA8P11142 646 aaKnown RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 MPZP25189 248 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 EIF2DP41214 584 aaKnown RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 MAT1AQ00266 395 aaKnown RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 GCNT1Q02742 428 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 TAF10Q12962 218 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 C15orf59Q2T9L4 293 aaPredicted RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 ELFN2Q5R3F8 820 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 MZT2BQ6NZ67 158 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 ZNF613Q6PF04 617 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 GTSCR1Q86UQ5 136 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 ZNF440Q8IYI8 595 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 KIRREL3Q8IZU9 778 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 TAGAPQ8N103 731 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 EID3Q8N140 333 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 NME8Q8N427 588 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 OR5AP2Q8NGF4 316 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 TMCO6Q96DC7 493 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 SPDL1Q96EA4 605 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 RSRC1Q96IZ7 334 aaKnown RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 ABHD1Q96SE0 405 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 MCRIP2Q9BUT9 160 aaKnown RBP3.17□□□□□ -1.9
RFC4-213ENST00000489028 TRIM15Q9C019 465 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 P2RY12Q9H244 342 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 GOLPH3LQ9H4A5 285 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 FGF21Q9NSA1 209 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 GIMAP4Q9NUV9 329 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 P4HTMQ9NXG6 502 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 EPHA6Q9UF33 1036 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 NME7Q9Y5B8 376 aa3.17□□□□□ -1.9
RFC4-213ENST00000489028 LOC100509620A0A075B734 347 aa3.16□□□□□ -1.9
RFC4-213ENST00000489028 A0A1B0GVY2 172 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms