RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 RAB40ALP0C0E4 278 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 PEBP1P30086 187 aaKnown RBP11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 TTPAP49638 278 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 VPS41P49754 854 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 CCL11P51671 97 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 IGFBP7Q16270 282 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 CPZQ66K79 652 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 TCTN3Q6NUS6 607 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 APLFQ8IW19 511 aaPredicted RBP11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 GPR135Q8IZ08 494 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 OTUD6BQ8N6M0 293 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 MFSD3Q96ES6 412 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 NLNQ9BYT8 704 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 HOMER3Q9NSC5 361 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 SYBUQ9NX95 663 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 TCFL5Q9UL49 500 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 SNX7Q9UNH6 387 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 KLHL20Q9Y2M5 609 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 PPP2R2CQ9Y2T4 447 aa11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 ASH1LQ9NR48 2969 aaKnown RBP11.52□□□□□ -0.57
CCHCR1-215ENST00000488920 A0A0J9YY10 115 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 GOLGA8KD6RF30 607 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 GOLGA8TH3BQL2 631 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 AP3B1O00203 1094 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 KDM1AO60341 852 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 AVILO75366 819 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 SLCO2B1O94956 709 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 PDGFAP04085 211 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 HBQ1P09105 142 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 AGXTP21549 392 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 PKLRP30613 574 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 GABRA4P48169 554 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 RAB28P51157 221 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 KLRB1Q12918 225 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 KIR2DS3Q14952 304 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 TMED2Q15363 201 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 KYNUQ16719 465 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 C1orf189Q5VU69 101 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 LRRC8BQ6P9F7 803 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 FAM198BQ6UWH4 519 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 TAX1BP1Q86VP1 789 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 DNAJC22Q8N4W6 341 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 TEX19Q8NA77 164 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 GSDMBQ8TAX9 411 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 MS4A14Q96JA4 679 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 IL17FQ96PD4 163 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 KIFC1Q9BW19 673 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 ING2Q9H160 280 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 P2RY12Q9H244 342 aa11.51□□□□□ -0.57
CCHCR1-215ENST00000488920 H3BMH7 237 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 RPN2P04844 631 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CBSLP0DN79 551 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 TPSB2P20231 275 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CD9P21926 228 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 ARNTP27540 789 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 FMO4P31512 558 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CBSP35520 551 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 PTGIRP43119 386 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 EIF3BP55884 814 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CDK16Q00536 496 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 GPS1Q13098 491 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 GRB7Q14451 532 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 NCF4Q15080 339 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 TPSAB1Q15661 275 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC5A12Q1EHB4 618 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 MLIPQ5VWP3 458 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 TTC27Q6P3X3 843 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 UNC5DQ6UXZ4 953 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 OTOAQ7RTW8 1153 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 SDCCAG8Q86SQ7 713 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 DCUN1D3Q8IWE4 304 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 MPP5Q8N3R9 675 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 ZNF655Q8N720 491 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 ADAMTS17Q8TE56 1095 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 SKA2Q8WVK7 121 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 FAM136AQ96C01 138 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 DPH2Q9BQC3 489 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 MENTQ9BUN1 341 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CHRNA10Q9GZZ6 450 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 ACSS2Q9NR19 701 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 IRAK4Q9NWZ3 460 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 GNPTGQ9UJJ9 305 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 TSR3Q9UJK0 312 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 RUVBL2Q9Y230 463 aaKnown RBP11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 AP1M2Q9Y6Q5 423 aa11.5□□□□□ -0.57
CCHCR1-215ENST00000488920 KRT87PA6NCN2 255 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 A6NL46 340 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 C9J4A7 227 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 KPNA5O15131 536 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 ZSCAN9O15535 394 aaPredicted RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 NRDCO43847 1150 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 KRT14P02533 472 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 MAGP20916 626 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 RPS3P23396 243 aaKnown RBP eCLIP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 GRIA3P42263 894 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 FOXK1P85037 733 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 KCNJ11Q14654 390 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms