RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 IGFBP7Q16270 282 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 PTCHD3Q3KNS1 767 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 CPZQ66K79 652 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 RHBDD2Q6NTF9 364 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 TLDC1Q6P9B6 456 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 ATCAYQ86WG3 371 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 LRRC6Q86X45 466 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 SLC22A18Q96BI1 424 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 IP6K3Q96PC2 410 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 IL22Q9GZX6 179 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 CATSPERZQ9NTU4 200 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 SPHK1Q9NYA1 384 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 ANAPC5Q9UJX4 755 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 ZNF451Q9Y4E5 1061 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 MRFAP1Q9Y605 127 aa12.61□□□□□ -0.39
ATPAF2-207ENST00000488753 PTPN13Q12923 2485 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CLEC18AA5D8T8 446 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 ISM1B1AKI9 464 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 KPNA5O15131 536 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 ZSCAN9O15535 394 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 S1PR4O95977 384 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 ZSCAN5DPP0CG00 497 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 ETS1P14921 441 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 AOAHP28039 575 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 PKLRP30613 574 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CCL11P51671 97 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CDK16Q00536 496 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CHAF1BQ13112 559 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 SEMA3AQ14563 771 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 TMED2Q15363 201 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 KYNUQ16719 465 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 ARMC3Q5W041 872 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CLEC18BQ6UXF7 455 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 NAPRTQ6XQN6 538 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 TRIM73Q86UV7 250 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 RAB43Q86YS6 212 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 DCUN1D3Q8IWE4 304 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 DNAJC22Q8N4W6 341 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 GLIS1Q8NBF1 620 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CLEC18CQ8NCF0 446 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 GBP5Q96PP8 586 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 PANX3Q96QZ0 392 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 MENTQ9BUN1 341 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 RAB11FIP5Q9BXF6 653 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CHRAC1Q9NRG0 131 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 HOMER3Q9NSC5 361 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 PLCL2Q9UPR0 1127 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
ATPAF2-207ENST00000488753 CD3EAPO15446 510 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 KLF7O75840 302 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 FKBP9O95302 570 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 IGHEP01854 428 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 CD9P21926 228 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 RPS3P23396 243 aaKnown RBP eCLIP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 PEBP1P30086 187 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 NPY2RP49146 381 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 DCDP81605 110 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 UBAP2LQ14157 1087 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 SSPNQ14714 243 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 PRUNE1Q86TP1 453 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 VRK3Q8IV63 474 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 ZBTB2Q8N680 514 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 OR2L8Q8NGY9 312 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 MRM3Q9HC36 420 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 ENAMQ9NRM1 1142 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 BFARQ9NZS9 450 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 MARCH4Q9P2E8 410 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 GNPTGQ9UJJ9 305 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 COL12A1Q99715 3063 aa12.59□□□□□ -0.39
ATPAF2-207ENST00000488753 PIKFYVEQ9Y2I7 2098 aa12.58□□□□□ -0.39
ATPAF2-207ENST00000488753 LRRK2Q5S007 2527 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 FLNCQ14315 2725 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 IQCF5A8MTL0 148 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 SEC16AO15027 2179 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 HCRTR1O43613 425 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 FGGP02679 453 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 CCDC175P0C221 793 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 CSE1LP55060 971 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 MLLT10P55197 1068 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 SESN2P58004 480 aaPredicted RBP12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 BASP1P80723 227 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 GRB7Q14451 532 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 DEFB110Q30KQ9 67 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 PTRHD1Q6GMV3 140 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 TTC23LQ6PF05 361 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 GSTA5Q7RTV2 222 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 LINC01555Q8NAE3 123 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 TRIM58Q8NG06 486 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 OR2Y1Q8NGV0 311 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 GSDMBQ8TAX9 411 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 LKAAEAR1Q8TD35 194 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 NACC2Q96BF6 587 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 FER1L6-AS2Q96M78 137 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 SMAD5Q99717 465 aaKnown RBP12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 NDC1Q9BTX1 674 aa12.58□□□□□ -0.4
ATPAF2-207ENST00000488753 KIFC1Q9BW19 673 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms