RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 KLHL35Q6PF15 583 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 FBXO38Q6PIJ6 1188 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 WDR74Q6RFH5 385 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 CYHR1Q6ZMK1 362 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 UBE2R2Q712K3 238 aaPredicted RBP10.71□□□□□ -0.69
UBE4B-210ENST00000488228 TAOK1Q7L7X3 1001 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 ERMP1Q7Z2K6 904 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 TRIM73Q86UV7 250 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 RASGRP3Q8IV61 690 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 ADGRF3Q8IZF5 1079 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SPATA6LQ8N4H0 392 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 LINC01555Q8NAE3 123 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 OR4D9Q8NGE8 314 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 DENND1AQ8TEH3 1009 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 ZFPM2Q8WW38 1151 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 ASB11Q8WXH4 323 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 DLG3Q92796 817 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 DHRS4Q9BTZ2 278 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 POPDC3Q9HBV1 291 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SNX15Q9NRS6 342 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 SPHK1Q9NYA1 384 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 CTNNAL1Q9UBT7 734 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 POMT2Q9UKY4 750 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 RAB21Q9UL25 225 aa10.71□□□□□ -0.69
UBE4B-210ENST00000488228 APC2O95996 2303 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SPTBP11277 2137 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 FAM221BA6H8Z2 402 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SMIM23A6NLE4 172 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 TRIM49D1C9J1S8 452 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 GFYI3L273 518 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 CDC7O00311 574 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 RASGRF2O14827 1237 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 RASSF9O75901 435 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 C9P02748 559 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ALDOAP04075 364 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 C8GP07360 202 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 CHRM5P08912 532 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 UGT2B7P16662 529 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 MAP4P27816 1152 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 PSMB5P28074 263 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SLCO1A2P46721 670 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 KPNA2P52292 529 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ZFP36L1Q07352 338 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ILF2Q12905 390 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 PRKAA1Q13131 559 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SP140Q13342 867 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SQSTM1Q13501 440 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 TSNQ15631 228 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 CLPPQ16740 277 aaPredicted RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ARMC6Q6NXE6 501 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 FOXR1Q6PIV2 292 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SBSNQ6UWP8 590 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 RAPH1Q70E73 1250 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 PLXDC1Q8IUK5 500 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 OR2L8Q8NGY9 312 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 OR2W6PQ8NHA6 318 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 CAVIN3Q969G5 261 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 RAD51AP1Q96B01 352 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 TMEM74Q96NL1 305 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 PKP4Q99569 1192 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 KLHL25Q9H0H3 589 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 UTP6Q9NYH9 597 aaKnown RBP10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ACTR10Q9NZ32 417 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SPATA7Q9P0W8 599 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SATB2Q9UPW6 733 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 PDE10AQ9Y233 779 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 LOXL2Q9Y4K0 774 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 NEUROG3Q9Y4Z2 214 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 SDK2Q58EX2 2172 aa10.7□□□□□ -0.7
UBE4B-210ENST00000488228 ACACBO00763 2458 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 MAP1BP46821 2468 aaKnown RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ASPMQ8IZT6 3477 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CCDC187A0A096LP49 1063 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PIPSLA2A3N6 862 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 TLCD2A6NGC4 264 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ZBTB14O43829 449 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 KDM1AO60341 852 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 KRT38O76015 456 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 SLC16A8O95907 504 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 MPOP05164 745 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CCDC166P0CW27 439 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PVRP15151 417 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CYP2A7P20853 494 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 LSSP48449 732 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 SEPHS1P49903 392 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 SERPINB9P50453 376 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CSRP3P50461 194 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 DLG1Q12959 904 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CAMK2BQ13554 666 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 TSTA3Q13630 321 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 FASTKQ14296 549 aaKnown RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CSHL1Q14406 222 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PPP1R3AQ16821 1122 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 TAF1BQ53T94 588 aaPredicted RBP10.69□□□□□ -0.7
UBE4B-210ENST00000488228 CACHD1Q5VU97 1274 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 ANKS6Q68DC2 871 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 TTC23LQ6PF05 361 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 PRSS42Q7Z5A4 293 aa10.69□□□□□ -0.7
UBE4B-210ENST00000488228 FAM20CQ8IXL6 584 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms