RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ARHGAP10A1A4S6 786 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 H7C0S8 307 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 LIN7AO14910 233 aaPredicted RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 HNRNPRO43390 633 aaKnown RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 ITGAXP20702 1163 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 MMP11P24347 488 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 ACADLP28330 430 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 PEBP1P30086 187 aaKnown RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 TSFMP43897 325 aaKnown RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 GCGRP47871 477 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 SPARCL1Q14515 664 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 ZRSR2Q15696 482 aaKnown RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 PRAMEF13Q5VWM6 474 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 IGFL2Q6UWQ7 119 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 TAS2R42Q7RTR8 314 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 TBC1D21Q8IYX1 336 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 KRT35Q92764 455 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 MARVELD3Q96A59 401 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 NACC2Q96BF6 587 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 TBL1YQ9BQ87 522 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 ARNT2Q9HBZ2 717 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 ENTPD4Q9Y227 616 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 TDRKHQ9Y2W6 561 aaKnown RBP18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 CCDC88CQ9P219 2028 aa18.71■□□□□ 0.59
SMPDL3A-202ENST00000487215 POLEQ07864 2286 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 SOCS6O14544 535 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 MFAP3LO75121 409 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 AP2A2O94973 939 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 EDN3P14138 238 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 ELAVL4P26378 380 aaKnown RBP18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 HADHBP55084 474 aaKnown RBP18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 OTUD4Q01804 1114 aaKnown RBP18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 DBN1Q16643 649 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 SLC5A12Q1EHB4 618 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 CCDC181Q5TID7 509 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 CDKL3Q8IVW4 592 aaPredicted RBP18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 PIANPQ8IYJ0 282 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 DNAJB14Q8TBM8 379 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 CCDC110Q8TBZ0 833 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 ACTL9Q8TC94 416 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 FKBP10Q96AY3 582 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 FERMT1Q9BQL6 677 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 EURLQ9NYK6 297 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 POLG2Q9UHN1 485 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 FEZ2Q9UHY8 353 aaPredicted RBP18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 CDC23Q9UJX2 597 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 PLAGL1Q9UM63 463 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 PRSS21Q9Y6M0 314 aa18.7■□□□□ 0.58
SMPDL3A-202ENST00000487215 NUP210LQ5VU65 1888 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 ISM1B1AKI9 464 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 KCNN4O15554 427 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 ZG16O60844 167 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 ALAS2P22557 587 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 CDC16Q13042 620 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 ZNF169Q14929 603 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 BRD3Q15059 726 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 AGAP7PQ5VUJ5 663 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 TTLL10Q6ZVT0 673 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 OVCH1Q7RTY7 1134 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 FAM20CQ8IXL6 584 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 OR5K2Q8NHB8 316 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 COG1Q8WTW3 980 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 FAR1Q8WVX9 515 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 ELMO1Q92556 727 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 DLG3Q92796 817 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 CNDP1Q96KN2 507 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 SPATA13Q96N96 652 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 AGAP4Q96P64 663 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 SPSB2Q99619 263 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 NLE1Q9NVX2 485 aaPredicted RBP18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 SMARCAL1Q9NZC9 954 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 HS3ST3B1Q9Y662 390 aa18.69■□□□□ 0.58
SMPDL3A-202ENST00000487215 A0A1B0GX78 115 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 MACROD2A1Z1Q3 448 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 BHMG1C9JSJ3 638 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 AP2A1O95782 977 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 RBP3P10745 1247 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 POU3F2P20265 443 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 MAGP20916 626 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 CACNG1Q06432 222 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 KIR2DS3Q14952 304 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 SKOR2Q2VWA4 1001 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 IRAK1BP1Q5VVH5 260 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 B3GNTL1Q67FW5 361 aaPredicted RBP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 KIRREL2Q6UWL6 708 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 NAPRTQ6XQN6 538 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 COX15Q7KZN9 410 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 KLHDC8BQ8IXV7 354 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 CDKN2AIPNLQ96HQ2 116 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 FAM118BQ9BPY3 351 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 UNKQ9C0B0 810 aaKnown RBP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 WDR54Q9H977 334 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 KLHL20Q9Y2M5 609 aa18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.68■□□□□ 0.58
SMPDL3A-202ENST00000487215 SLC5A10A0PJK1 596 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 STK10O94804 968 aaKnown RBP18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 ONECUT2O95948 504 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 ALBP02768 609 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 FTH1P02794 183 aa18.67■□□□□ 0.58
SMPDL3A-202ENST00000487215 NSG1P42857 185 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms