RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 PADI2Q9Y2J8 665 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 GRIP1Q9Y3R0 1128 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 SPIN1Q9Y657 262 aaPredicted RBP4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 KANK1Q14678 1352 aa4.73□□□□□ -1.65
PRPF38A-203ENST00000487160 BLMP54132 1417 aaPredicted RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 PTPRUQ92729 1446 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 TNS1Q9HBL0 1735 aaKnown RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SAA2-SAA4A0A096LPE2 208 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SMAD6O43541 496 aaKnown RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 PAPSS2O95340 614 aaPredicted RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 NTN1O95631 604 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 DAOP14920 347 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 CBLP22681 906 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 AZGP1P25311 298 aaKnown RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 TNFRSF8P28908 595 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 CCKBRP32239 447 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SLC9A3P48764 834 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 MMP15P51511 669 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 LIMK1P53667 647 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 TPD52P55327 224 aaPredicted RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 RBP5P82980 135 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 KIF19Q2TAC6 998 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 STXBP5Q5T5C0 1151 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 GRTP1Q5TC63 336 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 DET1Q7L5Y6 550 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 ARMC9Q7Z3E5 817 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 GLRX5Q86SX6 157 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 MUC20Q8N307 709 aaPredicted RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 RDM1Q8NG50 284 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SETD6Q8TBK2 473 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 ATL1Q8WXF7 558 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 ATP6V1E2Q96A05 226 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 MED30Q96HR3 178 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SFXN2Q96NB2 322 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 SPAG5Q96R06 1193 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 LMF2Q9BU23 707 aaKnown RBP4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 MYNNQ9NPC7 610 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 STK26Q9P289 416 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 RNF150Q9ULK6 438 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 BCL9LQ86UU0 1499 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 ABCA3Q99758 1704 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 MYOM3Q5VTT5 1437 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 FLT1P17948 1338 aa4.72□□□□□ -1.65
PRPF38A-203ENST00000487160 CAMTA1Q9Y6Y1 1673 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 RPRD2Q5VT52 1461 aaKnown RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 PIK3R4Q99570 1358 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 IGHV4OR15-8A0A075B7B6 117 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 A0A0G2JNG1 304 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 A0A1W2PPQ1 181 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 CTAGE9A4FU28 777 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 LACTBL1A8MY62 500 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 PTGESO14684 152 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 RAB40ALP0C0E4 278 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 CTAGE8P0CG41 777 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 ACP2P11117 423 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 PLA2G2AP14555 144 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 CSF2RAP15509 400 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 HOXC8P31273 242 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 TLX1P31314 330 aaPredicted RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 AHRP35869 848 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 FUT6P51993 359 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 MLLT10P55197 1068 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 MZT1Q08AG7 82 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 BFSP1Q12934 665 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 KIR2DS5Q14953 304 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 CTAGE4Q8IX94 777 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 MAML2Q8IZL2 1156 aaPredicted RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 LNX1Q8TBB1 728 aaPredicted RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 DEPDC1BQ8WUY9 529 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 NUDCD2Q8WVJ2 157 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 ROBO4Q8WZ75 1007 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 SPSB1Q96BD6 273 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 MGME1Q9BQP7 344 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 BTBD10Q9BSF8 475 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 POLR3CQ9BUI4 534 aaPredicted RBP4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 NME7Q9Y5B8 376 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 PTCH1Q13635 1447 aa4.71□□□□□ -1.66
PRPF38A-203ENST00000487160 NWD2Q9ULI1 1742 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ARHGEF37A1IGU5 675 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 HYKKA2RU49 373 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 PPP1R3DO95685 299 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ATP5BP06576 529 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 H1F0P07305 194 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 ZNF23P17027 643 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 MCCP23508 829 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 MPZP25189 248 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 IL15P40933 162 aaPredicted RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 THBS3P49746 956 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 POLR2LP62875 67 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 MDH1BQ5I0G3 518 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 PET117Q6UWS5 81 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 UNQ6126/PRO20091Q6UXV3 157 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 PACS1Q6VY07 963 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 C16orf82Q7Z2V1 217 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 PIWIL4Q7Z3Z4 852 aaKnown RBP4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 DEFB132Q7Z7B7 95 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 TMPRSS11BQ86T26 416 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 LONP2Q86WA8 852 aa4.7□□□□□ -1.66
PRPF38A-203ENST00000487160 COMMD2Q86X83 199 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms