RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 SLC17A4Q9Y2C5 497 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 MYO9BQ13459 2157 aa11.33□□□□□ -0.6
PRKCB-207ENST00000486868 ATP6AP2A0A1C7CYW4 349 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 A0A1W2PQU0 124 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 ZNF839A8K0R7 811 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 H3BQ06 376 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 AIM2O14862 343 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 LSM1O15116 133 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RNGTTO60942 597 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 ATP6AP2O75787 350 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RSL1D1O76021 490 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 IGLV3-19P01714 112 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PCCBP05166 539 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 COL9A1P20849 921 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PDHA2P29803 388 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 GNPDA1P46926 289 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 CTBSQ01459 385 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 FOXM1Q08050 763 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 TBL3Q12788 808 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 LRP8Q14114 963 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 FGL2Q14314 439 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 IRF4Q15306 451 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 KIF19Q2TAC6 998 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PUS10Q3MIT2 529 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 C8orf82Q6P1X6 216 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PRMT9Q6P2P2 845 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 AAGABQ6PD74 315 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PDZD3Q86UT5 571 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 THOC6Q86W42 341 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 SFRP1Q8N474 314 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 SNX31Q8N9S9 440 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 GLB1L3Q8NCI6 653 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 OR2T11Q8NH01 316 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 OR14C36Q8NHC7 312 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 GANCQ8TET4 914 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 FAM3CQ92520 227 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RAD51AP1Q96B01 352 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RCN3Q96D15 328 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 WDR34Q96EX3 536 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 FAM161BQ96MY7 647 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 PKP4Q99569 1192 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 SGPP1Q9BX95 441 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RNPEPL1Q9HAU8 725 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 SGK2Q9HBY8 427 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 NOP53Q9NZM5 478 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 SLC7A8Q9UHI5 535 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 TSR3Q9UJK0 312 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 G3BP2Q9UN86 482 aaKnown RBP11.32□□□□□ -0.6
PRKCB-207ENST00000486868 RNF11Q9Y3C5 154 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 TSC22D4Q9Y3Q8 395 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 COL4A2P08572 1712 aa11.32□□□□□ -0.6
PRKCB-207ENST00000486868 FAM234BA2RU67 622 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PRR19A6NJB7 356 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 SHISA7A6NL88 538 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 CHURC1-FNTBB4DL54 471 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 H0YIV9 168 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 CLGNO14967 610 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PI15O43692 258 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PEX11AO75192 247 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 FKBP6O75344 327 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PAK4O96013 591 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 ERGP11308 486 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 ACADMP11310 421 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 KELP23276 732 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 JAK1P23458 1154 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 IMPA1P29218 277 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 GCKP35557 465 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 NUDT1P36639 197 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PREPP48147 710 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 HTR6P50406 440 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 NUDT2P50583 147 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 CLCNKAP51800 687 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 CSTF3Q12996 717 aaKnown RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 TDGQ13569 410 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 RCAN2Q14206 197 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 INPP5AQ14642 412 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 ABRAXAS2Q15018 415 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 AP5B1Q2VPB7 878 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 LEXMQ3ZCV2 418 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 MMEL1Q495T6 779 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 SLC44A4Q53GD3 710 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 HABP4Q5JVS0 413 aaKnown RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 REP15Q6BDI9 236 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 GRHL2Q6ISB3 625 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 CAPN13Q6MZZ7 669 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 PAOXQ6QHF9 649 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 MBOAT1Q6ZNC8 495 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 GK5Q6ZS86 529 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 TRIM74Q86UV6 250 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 ZFAND4Q86XD8 727 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 DCUN1D3Q8IWE4 304 aa11.31□□□□□ -0.6
PRKCB-207ENST00000486868 LILRA3Q8N6C8 439 aaPredicted RBP11.31□□□□□ -0.6
PRKCB-207ENST00000486868 FNDC5Q8NAU1 212 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms