RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 FRG2BQ96QU4 278 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PALMDQ9NP74 551 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ATAD3AQ9NVI7 634 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 SMPD3Q9NY59 655 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 SUCOQ9UBS9 1254 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 GMPPBQ9Y5P6 360 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 EPCAMP16422 314 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PRKACGP22612 351 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 RRM2P31350 389 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ZNF140P52738 457 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PLA2G16P53816 162 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ZNF423Q2M1K9 1284 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 LHX8Q68G74 356 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ARMC6Q6NXE6 501 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 TMEM207Q6UWW9 146 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 B3GNT6Q6ZMB0 384 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 KBTBD2Q8IY47 623 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 TCEAL8Q8IYN2 117 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 TCAIMQ8N3R3 496 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 C1orf52Q8N6N3 182 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 GPR26Q8NDV2 337 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PHC3Q8NDX5 983 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PLEKHA8Q96JA3 519 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 LINC00854A0A1B0GVQ3 168 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 CYP7B1O75881 506 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 IGLV3-25P01717 112 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 RPN2P04844 631 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 GPIP06744 558 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ACRV1P26436 265 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 WDR5P61964 334 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 TRIM71Q2Q1W2 868 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 FAM46CQ5VWP2 391 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 BRAT1Q6PJG6 821 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 EZH1Q92800 747 aaPredicted RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 EXOSC8Q96B26 276 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 MRPS26Q9BYN8 205 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 DUSP12Q9UNI6 340 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 KCTD21Q4G0X4 260 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 CCL26Q9Y258 94 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 PRSS21Q9Y6M0 314 aa12.93□□□□□ -0.34
HMGN1-216ENST00000486741 MAP1BP46821 2468 aaKnown RBP12.93□□□□□ -0.34
HMGN1-216ENST00000486741 POP7O75817 140 aaKnown RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 IFNA14P01570 189 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 OPN1SWP03999 348 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 INPP1P49441 399 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 NUP107P57740 925 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SF1Q15637 639 aaKnown RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 RFTN2Q52LD8 501 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 PIGGQ5H8A4 983 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 CCNYL2Q5T2Q4 361 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 MED27Q6P2C8 311 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 AGTRAPQ6RW13 159 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 GAREM2Q75VX8 874 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 TRIM73Q86UV7 250 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 OR5AK3PQ8NH89 298 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 FAM81AQ8TBF8 368 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 RORBQ92753 470 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 ZNF229Q9UJW7 825 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 IL6P05231 212 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 POU2F1P14859 743 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 HOXC13P31276 330 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 VIPR1P32241 457 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 PRKCQQ04759 706 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 DGKKQ5KSL6 1271 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 CD300LGQ6UXG3 332 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 VITQ6UXI7 678 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SLC22A15Q8IZD6 547 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 AHI1Q8N157 1196 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SFRP1Q8N474 314 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 STX19Q8N4C7 294 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 BIRC7Q96CA5 298 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 LRCH3Q96II8 777 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 ZNF382Q96SR6 550 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 OSBPL6Q9BZF3 934 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 OR51B5Q9H339 312 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 TRIM45Q9H8W5 580 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 POPDC3Q9HBV1 291 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 TBC1D23Q9NUY8 699 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 MROH6A6NGR9 719 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 HIDE1A8MVS5 230 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SUV39H1O43463 412 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 AHCYL1O43865 530 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SOCS5O75159 536 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 MMP2P08253 660 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 ACP5P13686 325 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SLC6A2P23975 617 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 TIE1P35590 1138 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SSR2P43308 183 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 SLBPQ14493 270 aaKnown RBP eCLIP12.92□□□□□ -0.34
HMGN1-216ENST00000486741 LMNTD1Q8N9Z9 388 aa12.92□□□□□ -0.34
HMGN1-216ENST00000486741 OR9Q1Q8NGQ5 310 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms