RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 NKX2-8O15522 239 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 GPC4O75487 556 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 KLK3P07288 261 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 SFTPCP11686 197 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CHRM3P20309 590 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 BDKRB1P46663 353 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 ITGA1P56199 1179 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 POLE2P56282 527 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 PTK6Q13882 451 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 KIR2DS3Q14952 304 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 LONRF1Q17RB8 773 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 ANKRD20A4Q4UJ75 823 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 IZUMO3Q5VZ72 239 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CILP2Q8IUL8 1156 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 KLHL7Q8IXQ5 586 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 GPR135Q8IZ08 494 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 ZBTB2Q8N680 514 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 GABPB2Q8TAK5 448 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CALML6Q8TD86 181 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 RUNDC3BQ96NL0 473 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 TRIM56Q9BRZ2 755 aaKnown RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 FAM167BQ9BTA0 163 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 ACTR5Q9H9F9 607 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 C20orf96Q9NUD7 363 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 SPHK1Q9NYA1 384 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 IL1RAPL1Q9NZN1 696 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CDYLQ9Y232 598 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CRYL1Q9Y2S2 319 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 NEU2Q9Y3R4 380 aa12.46□□□□□ -0.41
CHMP3-208ENST00000486404 HEMK1Q9Y5R4 338 aaPredicted RBP12.46□□□□□ -0.41
CHMP3-208ENST00000486404 CDC14CA4D256 554 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 USP1O94782 785 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SLCO2B1O94956 709 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 MSL3P1P0C860 447 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 PYGBP11216 843 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 PGAM1P18669 254 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 OAS2P29728 719 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 CCNFP41002 786 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SLC1A2P43004 574 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 ADARP55265 1226 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 RPS15P62841 145 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SLC5A12Q1EHB4 618 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 DEFB109BQ30KR1 87 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 TTLL9Q3SXZ7 439 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 LINC00303Q3SY05 128 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 RNASEH2BQ5TBB1 312 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 CDHR3Q6ZTQ4 885 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 PCGF5Q86SE9 256 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 NAT8LQ8N9F0 302 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 OR1L3Q8NH93 324 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 MAGEC3Q8TD91 643 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SEC14L1Q92503 715 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 RAD51AP1Q96B01 352 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SLC22A18Q96BI1 424 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 TCTN2Q96GX1 697 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 OR2A14Q96R47 310 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 TWSG1Q9GZX9 223 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 ACTL8Q9H568 366 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 FBXO6Q9NRD1 293 aaPredicted RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 INTS7Q9NVH2 962 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SERTAD3Q9UJW9 196 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 RUVBL2Q9Y230 463 aaKnown RBP12.45□□□□□ -0.42
CHMP3-208ENST00000486404 SAR1BQ9Y6B6 198 aa12.45□□□□□ -0.42
CHMP3-208ENST00000486404 FASNP49327 2511 aaKnown RBP12.44□□□□□ -0.42
CHMP3-208ENST00000486404 C9J4A7 227 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 DNALI1O14645 258 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-208ENST00000486404 RASGRF2O14827 1237 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 OR2B3O76000 313 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 S1PR4O95977 384 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 HBQ1P09105 142 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PKMP14618 531 aaKnown RBP12.44□□□□□ -0.42
CHMP3-208ENST00000486404 CD9P21926 228 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 ATP5DP30049 168 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PAFAH1B1P43034 410 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 MAGEA3P43357 314 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 DR1Q01658 176 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 NFATC3Q12968 1075 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 GPS2Q13227 327 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 KCNAB2Q13303 367 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 ERV3-1Q14264 604 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 KYNUQ16719 465 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 CRTC2Q53ET0 693 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-208ENST00000486404 ATP1A1-AS1Q5TC04 95 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 SYDE1Q6ZW31 735 aaPredicted RBP12.44□□□□□ -0.42
CHMP3-208ENST00000486404 CENPUQ71F23 418 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 PRICKLE2Q7Z3G6 844 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 ZNF605Q86T29 641 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 KCNMB4Q86W47 210 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 DENND6AQ8IWF6 608 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 LMNTD2Q8IXW0 634 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 EXD3Q8N9H8 876 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 OR2L8Q8NGY9 312 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 SLCO2A1Q92959 643 aa12.44□□□□□ -0.42
CHMP3-208ENST00000486404 BIRC8Q96P09 236 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms