RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 DUS1LQ6P1R4 473 aaKnown RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 SPESP1Q6UW49 350 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 UNC5AQ6ZN44 842 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 PCGF5Q86SE9 256 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 VASH2Q86V25 355 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SLC35F6Q8N357 371 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 NAT8LQ8N9F0 302 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 OR5AR1Q8NGP9 310 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 FLVCR1-AS1Q8TAF5 88 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 HMGCLL1Q8TB92 370 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 COG1Q8WTW3 980 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 ZUFSPQ96AP4 578 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 MFSD3Q96ES6 412 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 TCTN2Q96GX1 697 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 MS4A14Q96JA4 679 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 SIGLEC10Q96LC7 697 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 OR2A14Q96R47 310 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 DPH2Q9BQC3 489 aaPredicted RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 MENTQ9BUN1 341 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 REPIN1Q9BWE0 567 aaKnown RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 KCNF1Q9H3M0 494 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 GPN2Q9H9Y4 310 aaPredicted RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 STARD5Q9NSY2 213 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 MARCH4Q9P2E8 410 aaPredicted RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 RNF14Q9UBS8 474 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 GNPTGQ9UJJ9 305 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 FARSAQ9Y285 508 aaKnown RBP6.78□□□□□ -1.32
VPS50-218ENST00000485994 KLK4Q9Y5K2 254 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 FAM169AQ9Y6X4 670 aa6.78□□□□□ -1.32
VPS50-218ENST00000485994 FER1L5A0AVI2 2057 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 MDC1Q14676 2089 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 GOLGA6L10A0A0M3HER8 536 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ZCWPW2A0A1B0GU75 182 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 CCDC78A2IDD5 438 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 TARM1B6A8C7 271 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 GPR37O15354 613 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 NKX2-8O15522 239 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 SIAH2O43255 324 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 PRICKLE3O43900 615 aaPredicted RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 CPNE3O75131 537 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 USP1O94782 785 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 TIAF1O95411 115 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 MATN4O95460 622 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 KLK3P07288 261 aaPredicted RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 CHRM5P08912 532 aaPredicted RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 CD63P08962 238 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 EBLN1P0CF75 366 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ST6GAL1P15907 406 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 TCN2P20062 427 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 CD9P21926 228 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 F8A1P23610 371 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 IVDP26440 423 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 CCNFP41002 786 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 RAB28P51157 221 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 GUCA2AQ02747 115 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 HSPA14Q0VDF9 509 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 PRKG2Q13237 762 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 GRB7Q14451 532 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ZNF789Q5FWF6 425 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 IZUMO3Q5VZ72 239 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 PTRHD1Q6GMV3 140 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 NEPROQ6NW34 567 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 TTC23LQ6PF05 361 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 BORAQ6PGQ7 559 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 SYDE1Q6ZW31 735 aaPredicted RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 NEK10Q6ZWH5 1172 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 HOOK3Q86VS8 718 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 CILP2Q8IUL8 1156 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 VRK3Q8IV63 474 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 PPIL6Q8IXY8 311 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 DNAJC22Q8N4W6 341 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 GALNT6Q8NCL4 622 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 OR2L8Q8NGY9 312 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 CALML6Q8TD86 181 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 MAGEC3Q8TD91 643 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 APOBEC4Q8WW27 367 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 JPH3Q8WXH2 748 aaPredicted RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 LPGAT1Q92604 370 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ANP32BQ92688 251 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 EXTL1Q92935 676 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 RAD51AP1Q96B01 352 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 RUNDC3BQ96NL0 473 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 SERPINB12Q96P63 405 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 NAT9Q9BTE0 207 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 SEMA4CQ9C0C4 833 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 FANCEQ9HB96 536 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 INTS10Q9NVR2 710 aaKnown RBP6.77□□□□□ -1.33
VPS50-218ENST00000485994 SYBUQ9NX95 663 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ACTR10Q9NZ32 417 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 SAMD15Q9P1V8 674 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 IL17BQ9UHF5 180 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 ICKQ9UPZ9 632 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 AP1M2Q9Y6Q5 423 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
VPS50-218ENST00000485994 A0A0J9YY10 115 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 GSAPA4D1B5 854 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 IQCF5A8MTL0 148 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 MEN1O00255 615 aa6.76□□□□□ -1.33
VPS50-218ENST00000485994 EIF3FO00303 357 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms