RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 SLC5A12Q1EHB4 618 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 CLEC18BQ6UXF7 455 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 MED25Q71SY5 747 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 SLC22A15Q8IZD6 547 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 TMEM102Q8N9M5 508 aaPredicted RBP24.79■■□□□ 1.56
HLA-F-227ENST00000485513 GLIS1Q8NBF1 620 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 CLEC18CQ8NCF0 446 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 PPHLN1Q8NEY8 458 aaKnown RBP24.79■■□□□ 1.56
HLA-F-227ENST00000485513 AP1M1Q9BXS5 423 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 G3BP2Q9UN86 482 aaKnown RBP24.79■■□□□ 1.56
HLA-F-227ENST00000485513 ZNF451Q9Y4E5 1061 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 PCDHGB7Q9Y5F8 929 aa24.79■■□□□ 1.56
HLA-F-227ENST00000485513 SPENQ96T58 3664 aaKnown RBP24.79■■□□□ 1.56
HLA-F-227ENST00000485513 RP1L1Q8IWN7 2480 aaPredicted RBP24.78■■□□□ 1.56
HLA-F-227ENST00000485513 GOLGA6L6A8MZA4 724 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 CBSLP0DN79 551 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 PEBP1P30086 187 aaKnown RBP24.78■■□□□ 1.56
HLA-F-227ENST00000485513 CBSP35520 551 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 RRADP55042 308 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 NADK2Q4G0N4 442 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 AARS2Q5JTZ9 985 aaKnown RBP24.78■■□□□ 1.56
HLA-F-227ENST00000485513 C1orf189Q5VU69 101 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 RHBDD2Q6NTF9 364 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 RAB43Q86YS6 212 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 VRK3Q8IV63 474 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 ASZ1Q8WWH4 475 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 CARD6Q9BX69 1037 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 ANAPC5Q9UJX4 755 aa24.78■■□□□ 1.56
HLA-F-227ENST00000485513 ZNF185O15231 689 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 ZSCAN9O15535 394 aaPredicted RBP24.77■■□□□ 1.56
HLA-F-227ENST00000485513 PKLRP30613 574 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 RAB28P51157 221 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 SRSF1Q07955 248 aaKnown RBP eCLIP24.77■■□□□ 1.56
HLA-F-227ENST00000485513 ATP1A4Q13733 1029 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 RPS6KA1Q15418 735 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 MLIPQ5VWP3 458 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 EFCAB3Q8N7B9 438 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 FDCSPQ8NFU4 85 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 LKAAEAR1Q8TD35 194 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 CATSPERZQ9NTU4 200 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 IRAK4Q9NWZ3 460 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 GPN3Q9UHW5 284 aaPredicted RBP24.77■■□□□ 1.56
HLA-F-227ENST00000485513 CDYLQ9Y232 598 aa24.77■■□□□ 1.56
HLA-F-227ENST00000485513 CCDC88CQ9P219 2028 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 A6NL46 340 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 IQCF5A8MTL0 148 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 GPC4O75487 556 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 KLF7O75840 302 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-227ENST00000485513 RPN2P04844 631 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 APOA4P06727 396 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 CTSBP07858 339 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 ZSCAN5DPP0CG00 497 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 OTX2P32243 289 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 RPL22P35268 128 aaKnown RBP24.76■■□□□ 1.55
HLA-F-227ENST00000485513 KYNUQ16719 465 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 PCID2Q5JVF3 399 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 MEI1Q5TIA1 1274 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 TLDC1Q6P9B6 456 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 LDB1Q86U70 411 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-227ENST00000485513 DNAJC22Q8N4W6 341 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 FAM26EQ8N5C1 309 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 ZNF655Q8N720 491 aaPredicted RBP24.76■■□□□ 1.55
HLA-F-227ENST00000485513 CFAP61Q8NHU2 1237 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 CPT1CQ8TCG5 803 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 PROKR1Q8TCW9 393 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 GBP5Q96PP8 586 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 CHRAC1Q9NRG0 131 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 TXLNGQ9NUQ3 528 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 DHCR7Q9UBM7 475 aaKnown RBP24.76■■□□□ 1.55
HLA-F-227ENST00000485513 SRPK3Q9UPE1 567 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 PLCL2Q9UPR0 1127 aa24.76■■□□□ 1.55
HLA-F-227ENST00000485513 PRMT5O14744 637 aaPredicted RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 ATXN8OSP0DMR3 200 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 TTPAP49638 278 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 SESN2P58004 480 aaPredicted RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 DCDP81605 110 aaKnown RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 CCNG2Q16589 344 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 DCUN1D3Q8IWE4 304 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 KRT222Q8N1A0 295 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 IP6K3Q96PC2 410 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 NUDT9Q9BW91 350 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 EIF2B3Q9NR50 452 aaKnown RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 GPR83Q9NYM4 423 aa24.75■■□□□ 1.55
HLA-F-227ENST00000485513 MARCH4Q9P2E8 410 aaPredicted RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 IFT80Q9P2H3 777 aaPredicted RBP24.75■■□□□ 1.55
HLA-F-227ENST00000485513 DPM1O60762 260 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 VPS4BO75351 444 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 CD63P08962 238 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 MAGP20916 626 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 AOAHP28039 575 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 SSPNQ14714 243 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 TMED2Q15363 201 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 SIX1Q15475 284 aaPredicted RBP24.74■■□□□ 1.55
HLA-F-227ENST00000485513 UNC5DQ6UXZ4 953 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 MRGPREQ86SM8 312 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 HPS6Q86YV9 775 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 FAM20CQ8IXL6 584 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 LINC01555Q8NAE3 123 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 SLC22A18Q96BI1 424 aa24.74■■□□□ 1.55
HLA-F-227ENST00000485513 MENTQ9BUN1 341 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms