RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 J3KR12 359 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 TRAFD1O14545 582 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 PRODHO43272 600 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 LCA5LO95447 670 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 IGHEP01854 428 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 HEXAP06865 529 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 XRCC1P18887 633 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 MST1P26927 711 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 FLT3P36888 993 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 USP8P40818 1118 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SCNN1BP51168 640 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SOX8P57073 446 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 FOXL2P58012 376 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 HSD11B2P80365 405 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 GCNT1Q02742 428 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 RBPJQ06330 500 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 DPTQ07507 201 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 ABRQ12979 859 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 AIMP2Q13155 320 aaKnown RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 GPR18Q14330 331 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SEPT7Q16181 437 aaKnown RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 C3AR1Q16581 482 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 CYP2A13Q16696 494 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 LONRF1Q17RB8 773 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 PTPN20Q4JDL3 420 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 RAB6CQ53S08 254 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 FAM102AQ5T9C2 384 aaPredicted RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 MANEALQ5VSG8 457 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 AGAP7PQ5VUJ5 663 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 MLIPQ5VWP3 458 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 TRNP1Q6NT89 227 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 TEPPQ6URK8 271 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 IGFL2Q6UWQ7 119 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 LINC00696Q6ZRV3 163 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 TSPAN33Q86UF1 283 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 LMO3Q8TAP4 145 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 NINJ1Q92982 152 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SNX21Q969T3 373 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 TBC1D31Q96DN5 1066 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 COX14Q96I36 57 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 C18orf12Q96KH6 178 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 NSMCE3Q96MG7 304 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 CFAP57Q96MR6 1250 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 AGAP4Q96P64 663 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 ZNF559Q9BR84 538 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 RAB6CQ9H0N0 254 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 ABCG8Q9H221 673 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 RETREG1Q9H6L5 497 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 EPS8L2Q9H6S3 715 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 PCDH18Q9HCL0 1135 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SLC40A1Q9NP59 571 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 KLC4Q9NSK0 619 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 SEMA5BQ9P283 1151 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 MYOTQ9UBF9 498 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 EPHA6Q9UF33 1036 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 NEU3Q9UQ49 428 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 CNTN6Q9UQ52 1028 aa5.17□□□□□ -1.58
PTPN4-210ENST00000485247 PTRH2Q9Y3E5 179 aaKnown RBP5.17□□□□□ -1.58
PTPN4-210ENST00000485247 CACNA1CQ13936 2221 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 NCOA6Q14686 2063 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 UBA6A0AVT1 1052 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 OR52A4PA6NMU1 304 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 PDZK1P1A8MUH7 402 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 AGPSO00116 658 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 SLC16A3O15427 465 aaKnown RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 SLC19A2O60779 497 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 PALMO75781 387 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 WISP2O76076 250 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 AGXTP21549 392 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 HADHAP40939 763 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 FOLR3P41439 243 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CSNK1DP48730 415 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 SNX16P57768 344 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 YBEYP58557 167 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 PLP2Q04941 152 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CDO1Q16878 200 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 TMTC4Q5T4D3 741 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 IRAK1BP1Q5VVH5 260 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 RPUSD3Q6P087 351 aaKnown RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 SPATC1Q76KD6 591 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 PPP1R32Q7Z5V6 425 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 TECPR1Q7Z6L1 1165 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 KMT5CQ86Y97 462 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 D2HGDHQ8N465 521 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 RTL3Q8N8U3 475 aaKnown RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 WFDC11Q8NEX6 87 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 OR8K5Q8NH50 307 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 EXD1Q8NHP7 514 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CA5BP1Q8WTZ4 195 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CCDC47Q96A33 483 aaKnown RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CXorf40BQ96DE9 158 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 TREX2Q9BQ50 279 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 YIPF4Q9BSR8 244 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 NDC1Q9BTX1 674 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 CINPQ9BW66 212 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 TLR10Q9BXR5 811 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 SLC7A5P2Q9GIP4 190 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 RAB33BQ9H082 229 aa5.16□□□□□ -1.58
PTPN4-210ENST00000485247 ACTR5Q9H9F9 607 aaPredicted RBP5.16□□□□□ -1.58
PTPN4-210ENST00000485247 UPF2Q9HAU5 1272 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms