RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 C11orf96Q7Z7L8 435 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 HPS6Q86YV9 775 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 FAM131CQ96AQ9 280 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 PPP3R2Q96LZ3 170 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 CDRT15Q96T59 188 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 PKP4Q99569 1192 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 WDR26Q9H7D7 661 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 DCLRE1BQ9H816 532 aa16.27■□□□□ 0.2
CTSA-207ENST00000484855 CHUKO15111 745 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 KRT36O76013 467 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 C1orf105O95561 183 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 PAK4O96013 591 aaPredicted RBP16.27■□□□□ 0.19
CTSA-207ENST00000484855 ADPRHP54922 357 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 MRPS21P82921 87 aaKnown RBP16.27■□□□□ 0.19
CTSA-207ENST00000484855 GRIK2Q13002 908 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 SGCGQ13326 291 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 LRP8Q14114 963 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 INPP5AQ14642 412 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 IMPG1Q17R60 797 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 SGO1Q5FBB7 561 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 LRRTM4Q86VH4 590 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 ENDOVQ8N8Q3 282 aaKnown RBP16.27■□□□□ 0.19
CTSA-207ENST00000484855 TP53I13Q8NBR0 393 aaPredicted RBP16.27■□□□□ 0.19
CTSA-207ENST00000484855 FBXO15Q8NCQ5 510 aaPredicted RBP16.27■□□□□ 0.19
CTSA-207ENST00000484855 USP7Q93009 1102 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 MED8Q96G25 268 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 TEX101Q9BY14 249 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 DPEP2Q9H4A9 486 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 ZNHIT2Q9UHR6 403 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 CCL27Q9Y4X3 112 aa16.27■□□□□ 0.19
CTSA-207ENST00000484855 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 C9JVG2 144 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 RNGTTO60942 597 aaKnown RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 PSMG1O95456 288 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 TEAD1P28347 426 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 IMPA1P29218 277 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 EMX2Q04743 252 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SMAD4Q13485 552 aaKnown RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 NAE1Q13564 534 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 AP5B1Q2VPB7 878 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SLC44A4Q53GD3 710 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 FAM83HQ6ZRV2 1179 aaPredicted RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 THOC6Q86W42 341 aaKnown RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 L3MBTL4Q8NA19 623 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 GAS2L1Q99501 681 aaPredicted RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 OSBPL6Q9BZF3 934 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 PACSIN3Q9UKS6 424 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SCML1Q9UN30 329 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SNX6Q9UNH7 406 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 OR1A2Q9Y585 309 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 KCNE1BA0A087WTH5 132 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 ANGPT2O15123 496 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 MBTPS2O43462 519 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SLC16A8O95907 504 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 HALP42357 657 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 DPP6P42658 865 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 PSME3P61289 254 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 CCDC6Q16204 474 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 TMEM259Q4ZIN3 620 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 IER5LQ5T953 404 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 TRIM46Q7Z4K8 759 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 AMZ2Q86W34 360 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 PLCD3Q8N3E9 789 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 PCYOX1LQ8NBM8 494 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SIPA1Q96FS4 1042 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 SLC45A3Q96JT2 553 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 MAGEB10Q96LZ2 347 aaPredicted RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 C1QTNF2Q9BXJ5 285 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 ELOVL6Q9H5J4 265 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 NOP53Q9NZM5 478 aaKnown RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 ZIM2Q9NZV7 527 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 POMPQ9Y244 141 aa16.26■□□□□ 0.19
CTSA-207ENST00000484855 POLR3HQ9Y535 204 aaPredicted RBP16.26■□□□□ 0.19
CTSA-207ENST00000484855 SLC22A3O75751 556 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 CAPN3P20807 821 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 KCNK10P57789 538 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 RPL38P63173 70 aaKnown RBP16.25■□□□□ 0.19
CTSA-207ENST00000484855 HMGCS1Q01581 520 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 RCN1Q15293 331 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 BLOC1S3Q6QNY0 202 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 HACD2Q6Y1H2 254 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 KLHDC8AQ8IYD2 350 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 PPFIBP2Q8ND30 876 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 RPLP0P6Q8NHW5 317 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 SELENOMQ8WWX9 145 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 MTFMTQ96DP5 389 aaKnown RBP16.25■□□□□ 0.19
CTSA-207ENST00000484855 C1QTNF7Q9BXJ2 289 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 SLC17A9Q9BYT1 436 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 PHPT1Q9NRX4 125 aaPredicted RBP16.25■□□□□ 0.19
CTSA-207ENST00000484855 INTS7Q9NVH2 962 aaKnown RBP16.25■□□□□ 0.19
CTSA-207ENST00000484855 NDUFAF1Q9Y375 327 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 PCDHGA7Q9Y5G6 932 aa16.25■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3DA0A087WVF3 549 aa16.24■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3IA0A087WXS9 549 aa16.24■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3EA0A087X179 549 aa16.24■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3KA0A087X1G2 549 aa16.24■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3FA6NER0 549 aaPredicted RBP16.24■□□□□ 0.19
CTSA-207ENST00000484855 TBC1D3LB9A6J9 549 aa16.24■□□□□ 0.19
CTSA-207ENST00000484855 PDYNP01213 254 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms