RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PCDHGB2Q9Y5G2 931 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ARHGEF17Q96PE2 2063 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NBEAQ8NFP9 2946 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TRPC5OSA6NMA1 111 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 FCHO1O14526 889 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 INPP4BO15327 924 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 AQP9O43315 295 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TNFSF14O43557 240 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DIAPH2O60879 1101 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SOD1P00441 154 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 F12P00748 615 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 FUCA1P04066 466 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CSF2P04141 144 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GFAPP14136 432 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NQO1P15559 274 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ALOX15P16050 662 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 IMPDH1P20839 514 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RPS3P23396 243 aaKnown RBP eCLIP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RXRGP48443 463 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RGS4P49798 205 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 MNAT1P51948 309 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PGGT1BP53609 377 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ALDH18A1P54886 795 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 IL2P60568 153 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NCALDP61601 193 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DAB2P98082 770 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 XIAPP98170 497 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 FOXK2Q01167 660 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PTSQ03393 145 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GALNT1Q10472 559 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NFATC2Q13469 925 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 NFATC4Q14934 902 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SUZ12Q15022 739 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TTLL9Q3SXZ7 439 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ARL13AQ5H913 290 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PERM1Q5SV97 790 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 METTL21CQ5VZV1 264 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 CES4AQ5XG92 561 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 FAM91A1Q658Y4 838 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RAET1GQ6H3X3 334 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GUSBP11Q6P575 273 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PAQR3Q6TCH7 311 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 UNQ6494/PRO21346Q6UXR6 183 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 MACC1Q6ZN28 852 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ISCA2Q86U28 154 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PIM3Q86V86 326 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SERPINA9Q86WD7 417 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 HEATR4Q86WZ0 1026 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ARHGAP24Q8N264 748 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM151AQ8N4L1 468 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF781Q8N8C0 355 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 HCAR2Q8TDS4 363 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ANKRD49Q8WVL7 239 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 STON2Q8WXE9 905 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ADAMTS14Q8WXS8 1223 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 KIAA1191Q96A73 305 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ULK4Q96C45 1275 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 EID2BQ96D98 161 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 DTD2Q96FN9 168 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 APOLD1Q96LR9 279 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PANX3Q96QZ0 392 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 MCCC1Q96RQ3 725 aaPredicted RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 SORT1Q99523 831 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 GPR21Q99679 349 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 UNKQ9C0B0 810 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ERVMER34-1Q9H9K5 563 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 KLQ9UEF7 1012 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 LNPEPQ9UIQ6 1025 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 HAO1Q9UJM8 370 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 RALYQ9UKM9 306 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM98Q9Y2Y6 226 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 PRKAB1Q9Y478 270 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ST14Q9Y5Y6 855 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 HS3ST3A1Q9Y663 406 aa6.79□□□□□ -1.32
BRCA1-216ENST00000484087 OAS3Q9Y6K5 1087 aaKnown RBP6.79□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF106Q9H2Y7 1883 aaKnown RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 DSPP15924 2871 aaKnown RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PMS2P1A4D2B8 440 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 A8MT66 165 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 FADS2P1A8MWK0 482 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SUPT3HB4E1H0 165 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 WIPF1O43516 503 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 ZBTB14O43829 449 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 MAGEC1O60732 1142 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SNX2O60749 519 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 KERAO60938 352 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SUPT3HO75486 399 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 RFPL3O75679 317 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SUPT7LO94864 414 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 RASGRP1O95267 797 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 WISP3O95389 354 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 S100BP04271 92 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 SBK3P0C264 359 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PRSS56P0CW18 603 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 NCF2P19878 526 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 ACRV1P26436 265 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 AK4P27144 223 aaPredicted RBP6.78□□□□□ -1.32
BRCA1-216ENST00000484087 PTPN4P29074 926 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 CA5AP35218 305 aa6.78□□□□□ -1.32
BRCA1-216ENST00000484087 NUDT1P36639 197 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms