RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 SEMA3AQ14563 771 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 NCF4Q15080 339 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 TMED2Q15363 201 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 PAPD7Q5XG87 772 aaKnown RBP19.16■□□□□ 0.66
HPS4-213ENST00000483631 RHBDD2Q6NTF9 364 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 PRUNE1Q86TP1 453 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 DCUN1D3Q8IWE4 304 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 PROKR1Q8TCW9 393 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 FAM60AQ9NP50 221 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 ACSS2Q9NR19 701 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 SPHK1Q9NYA1 384 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 SRPK3Q9UPE1 567 aa19.16■□□□□ 0.66
HPS4-213ENST00000483631 FLNCQ14315 2725 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 CD3EAPO15446 510 aaKnown RBP19.15■□□□□ 0.66
HPS4-213ENST00000483631 OR2B3O76000 313 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 FKBP9O95302 570 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 FGGP02679 453 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 ZSCAN5DPP0CG00 497 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 TPSB2P20231 275 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 AOAHP28039 575 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 BASP1P80723 227 aaKnown RBP19.15■□□□□ 0.66
HPS4-213ENST00000483631 TPSAB1Q15661 275 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 LCN10Q6JVE6 187 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 TLDC1Q6P9B6 456 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 HPS6Q86YV9 775 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 TMEM102Q8N9M5 508 aaPredicted RBP19.15■□□□□ 0.66
HPS4-213ENST00000483631 IP6K3Q96PC2 410 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 MENTQ9BUN1 341 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 KIFC1Q9BW19 673 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 RAB11FIP5Q9BXF6 653 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 TRIM55Q9BYV6 548 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 ING2Q9H160 280 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 LZTFL1Q9NQ48 299 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 GNPTGQ9UJJ9 305 aa19.15■□□□□ 0.66
HPS4-213ENST00000483631 HECTD1Q9ULT8 2610 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 CEACAM4O75871 244 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 SESN2P58004 480 aaPredicted RBP19.14■□□□□ 0.65
HPS4-213ENST00000483631 ZIC1Q15915 447 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 LRRC8BQ6P9F7 803 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 NAPRTQ6XQN6 538 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 MED25Q71SY5 747 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 GSTA5Q7RTV2 222 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 TRIM73Q86UV7 250 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 LRRC8AQ8IWT6 810 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 DNAJC22Q8N4W6 341 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 SLC25A23Q9BV35 468 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 KLHL25Q9H0H3 589 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 P2RY12Q9H244 342 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 PLCL2Q9UPR0 1127 aa19.14■□□□□ 0.65
HPS4-213ENST00000483631 CCDC88CQ9P219 2028 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 DOPEY2Q9Y3R5 2298 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 LRRK2Q5S007 2527 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 ISM1B1AKI9 464 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 K7EM74 188 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 ZSCAN9O15535 394 aaPredicted RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 NRDCO43847 1150 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 DNAJB5O75953 348 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 TMEM63AO94886 807 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 S1PR4O95977 384 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 CD9P21926 228 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 PEBP1P30086 187 aaKnown RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 PTGIRP43119 386 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 CD97P48960 835 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 PGDP52209 483 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 RRADP55042 308 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 PTCHD3Q3KNS1 767 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 PTRHD1Q6GMV3 140 aaKnown RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 RAB43Q86YS6 212 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 VRK3Q8IV63 474 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 OR2L8Q8NGY9 312 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 LKAAEAR1Q8TD35 194 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 DENND1AQ8TEH3 1009 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 ENAMQ9NRM1 1142 aa19.13■□□□□ 0.65
HPS4-213ENST00000483631 INTS7Q9NVH2 962 aaKnown RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 MARCH4Q9P2E8 410 aaPredicted RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 G3BP2Q9UN86 482 aaKnown RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 TNRC6AQ8NDV7 1962 aaKnown RBP19.13■□□□□ 0.65
HPS4-213ENST00000483631 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.12■□□□□ 0.65
HPS4-213ENST00000483631 ARGFXA6NJG6 315 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 PFDN6O15212 129 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 NDUFS3O75489 264 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 NR1D1P20393 614 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 MAGEA6P43360 314 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 ADARP55265 1226 aaKnown RBP19.12■□□□□ 0.65
HPS4-213ENST00000483631 DCDP81605 110 aaKnown RBP19.12■□□□□ 0.65
HPS4-213ENST00000483631 SARNPP82979 210 aaKnown RBP19.12■□□□□ 0.65
HPS4-213ENST00000483631 GRB7Q14451 532 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 RNF187Q5TA31 235 aaPredicted RBP19.12■□□□□ 0.65
HPS4-213ENST00000483631 CPZQ66K79 652 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 MRNIPQ6NTE8 343 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 TTC23LQ6PF05 361 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 GSDMBQ8TAX9 411 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 MIB2Q96AX9 1013 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 RAD51AP1Q96B01 352 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 GBP5Q96PP8 586 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 TCF12Q99081 682 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 PLAGL1Q9UM63 463 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 ZNF451Q9Y4E5 1061 aa19.12■□□□□ 0.65
HPS4-213ENST00000483631 IQCF5A8MTL0 148 aa19.11■□□□□ 0.65
HPS4-213ENST00000483631 H3BMM5 538 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms