RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 COX14Q96I36 57 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 LRCH3Q96II8 777 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 SLC45A3Q96JT2 553 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 SLC39A3Q9BRY0 314 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 OR2AG1Q9H205 316 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 ATXN10Q9UBB4 475 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 LEF1Q9UJU2 399 aaPredicted RBP12.9□□□□□ -0.34
CPNE1-225ENST00000483495 SNX6Q9UNH7 406 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 SLC22A14Q9Y267 594 aa12.9□□□□□ -0.34
CPNE1-225ENST00000483495 LRRK1Q38SD2 2015 aa12.9□□□□□ -0.35
CPNE1-225ENST00000483495 CASQ2O14958 399 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PRAMEF4O60810 478 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 SLC2A4P14672 509 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ATP6V1C1P21283 382 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 SLC6A2P23975 617 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PDHA2P29803 388 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 MTHFRP42898 656 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 TAS2R38P59533 333 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PLOD1Q02809 727 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF33BQ06732 778 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 DLX2Q07687 328 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 AGERQ15109 404 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 CST6Q15828 149 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C6orf10Q5SRN2 563 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 AGBL4Q5VU57 503 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PRAMEF9Q5VWM5 478 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF547Q8IVP9 402 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 SLC15A3Q8IY34 581 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 AADATQ8N5Z0 425 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 DPP10Q8N608 796 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 FAM156AQ8NDB6 213 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 VPS33AQ96AX1 596 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PYCR2Q96C36 320 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 NAF1Q96HR8 494 aaKnown RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 HIC2Q96JB3 615 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 FOPNLQ96NB1 174 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ACPTQ9BZG2 426 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 LRTM1Q9HBL6 345 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 STOX2Q9P2F5 926 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 EIF3LQ9Y262 564 aaKnown RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 POLR3HQ9Y535 204 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 KRT87PA6NCN2 255 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 H3BM21 787 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 NME4O00746 187 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 MID1O15344 667 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 RSL1D1O76021 490 aaKnown RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ADH1BP00325 375 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PDYNP01213 254 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C8BP07358 591 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 HSD17B1P14061 328 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 TCN1P20061 433 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C5AR1P21730 350 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 KIR2DL1P43626 348 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 GALK1P51570 392 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 HMGCS1Q01581 520 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 GTF2H3Q13889 308 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 KIAA0040Q15053 153 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 CPSF6Q16630 551 aaKnown RBP eCLIP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PAGE3Q5JUK9 113 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 LIPJQ5W064 366 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 AGTRAPQ6RW13 159 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 MTSS1LQ765P7 747 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 CHPFQ8IZ52 775 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 OR56A3Q8NH54 315 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ATG10Q9H0Y0 220 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
CPNE1-225ENST00000483495 EPS15L1Q9UBC2 864 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 FAM8A1Q9UBU6 413 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 ZNHIT2Q9UHR6 403 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 PCDHA9Q9Y5H5 950 aa12.89□□□□□ -0.35
CPNE1-225ENST00000483495 K7EQS6 105 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 RNASEH1O60930 286 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 C1orf105O95561 183 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 JUPP14923 745 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PCSK2P16519 638 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 ZNF8P17098 575 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 ITPKAP23677 461 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 IMPA1P29218 277 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PBLDP30039 288 aaPredicted RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 SOX9P48436 509 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 MRPS22P82650 360 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 NFYCQ13952 458 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 CCSMST1Q4G0I0 132 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 TIGD2Q4W5G0 525 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PNCKQ6P2M8 343 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PRR23BQ6ZRT6 265 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 THOC6Q86W42 341 aaKnown RBP12.88□□□□□ -0.35
CPNE1-225ENST00000483495 TRAPPC5Q8IUR0 188 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 TMEM126BQ8IUX1 230 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 PLA2G15Q8NCC3 412 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 OR2L2Q8NH16 312 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 SELENOMQ8WWX9 145 aa12.88□□□□□ -0.35
CPNE1-225ENST00000483495 EZH1Q92800 747 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms