RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 ITPKAP23677 461 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PDHA2P29803 388 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 GGT5P36269 586 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PLIN5Q00G26 463 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 HNRNPA1L2Q32P51 320 aaKnown RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 LYPLAL1Q5VWZ2 237 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 EGFLAMQ63HQ2 1017 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 KRT80Q6KB66 452 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 OGFOD2Q6N063 350 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 EFL1Q7Z2Z2 1120 aaKnown RBP14.11□□□□□ -0.15
CHD3-211ENST00000481999 SLC15A3Q8IY34 581 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 ALDH16A1Q8IZ83 802 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PACRGLQ8N7B6 248 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 TERB1Q8NA31 727 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 FNDC5Q8NAU1 212 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 ZFP28Q8NHY6 868 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 MPP4Q96JB8 637 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 FAM129BQ96TA1 746 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 CD244Q9BZW8 370 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PNPLA3Q9NST1 481 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 KCTD5Q9NXV2 234 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 PRKAB1Q9Y478 270 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 ST14Q9Y5Y6 855 aa14.11□□□□□ -0.15
CHD3-211ENST00000481999 DHRS12A0PJE2 317 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 H6PDO95479 791 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 SOD1P00441 154 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ZNF30P17039 623 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 IL12AP29459 219 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 GJA4P35212 333 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 CASP2P42575 452 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 HYAL1Q12794 435 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ABRQ12979 859 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 GRIK2Q13002 908 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 RFTN2Q52LD8 501 aaPredicted RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 C6orf136Q5SQH8 315 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 LCN8Q6JVE9 175 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 BLOC1S3Q6QNY0 202 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 DPPA4Q7L190 304 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 SPATA19Q7Z5L4 167 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 MILR1Q7Z6M3 343 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 NUSAP1Q9BXS6 441 aaKnown RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 ANKRD60Q9BZ19 345 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ACTR3BQ9P1U1 418 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 OPTCQ9UBM4 332 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 GULP1Q9UBP9 304 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 GPR45Q9Y5Y3 372 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 CXorf51AA0A1B0GTR3 108 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ASPDHA6ND91 283 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 RSL1D1O76021 490 aaKnown RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 EPHX1P07099 455 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 SRPRAP08240 638 aaKnown RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 MSH3P20585 1137 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 SLC6A2P23975 617 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ZFP36L2P47974 494 aaKnown RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 NEK2P51955 445 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 CPSF6Q16630 551 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHD3-211ENST00000481999 TBCELQ5QJ74 424 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 PLPP6Q8IY26 295 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ZNF557Q8N988 423 aaPredicted RBP14.1□□□□□ -0.15
CHD3-211ENST00000481999 FAM110BQ8TC76 370 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 LRRC58Q96CX6 371 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 HIC2Q96JB3 615 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 PFDN4Q9NQP4 134 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 CMTM6Q9NX76 183 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 KLQ9UEF7 1012 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 MYRFQ9Y2G1 1151 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 ANGPTL3Q9Y5C1 460 aa14.1□□□□□ -0.15
CHD3-211ENST00000481999 GOLGA4Q13439 2230 aaKnown RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 TSPAN11A1L157 253 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 SOBPA7XYQ1 873 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PRAMEF4O60810 478 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 RECQL5O94762 991 aaPredicted RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 CHEK2O96017 543 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PRR35P0CG20 571 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 CKMT2P17540 419 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 IL10P22301 178 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PSMA4P25789 261 aaKnown RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 MRPL19P49406 292 aaKnown RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 PRKCQQ04759 706 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 TTLL9Q3SXZ7 439 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PRAMEF9Q5VWM5 478 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 GPR149Q86SP6 731 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 NRTNQ99748 197 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 CCT7Q99832 543 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 TRIM54Q9BYV2 358 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 TMEM245Q9H330 911 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 AURKCQ9UQB9 309 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 VPS13AQ96RL7 3174 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 SYNCRIPO60506 623 aaKnown RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 G6PDP11413 515 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 ZNF23P17027 643 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PTGR1Q14914 329 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 NR6A1Q15406 480 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 ZNF284Q2VY69 593 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 PTCHD3Q3KNS1 767 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 NHSL2Q5HYW2 709 aa14.09□□□□□ -0.15
CHD3-211ENST00000481999 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.09□□□□□ -0.15
CHD3-211ENST00000481999 INTS11Q5TA45 600 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms