RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 CHAF1BQ13112 559 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 WTAPQ15007 396 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 RRS1Q15050 365 aaKnown RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 MEA1Q16626 185 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 MEP1AQ16819 746 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 RAB41Q5JT25 222 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 PLEKHS1Q5SXH7 462 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 SPATA1Q5VX52 437 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 TMEM198Q66K66 360 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 FAM171BQ6P995 826 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 RAD9BQ6WBX8 426 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 CLEC17AQ6ZS10 378 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 TPRG1Q6ZUI0 275 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 KCTD8Q6ZWB6 473 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 FASTKD5Q7L8L6 764 aaKnown RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 SLC26A9Q7LBE3 791 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 ATG9AQ7Z3C6 839 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 DSG4Q86SJ6 1040 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 MCEMP1Q8IX19 187 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 SCYL3Q8IZE3 742 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 C17orf53Q8N3J3 647 aaPredicted RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 OR52I2Q8NH67 350 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 PHF21AQ96BD5 680 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 POLR3CQ9BUI4 534 aaPredicted RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 HRH4Q9H3N8 390 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 DNAJC18Q9H819 358 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 ZFP57Q9NU63 452 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 TRMT1Q9NXH9 659 aaKnown RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 NSMCE4AQ9NXX6 385 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 TBC1D29Q9UFV1 150 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 POLG2Q9UHN1 485 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 FAF1Q9UNN5 650 aaPredicted RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 GPR34Q9UPC5 381 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 EXO1Q9UQ84 846 aaKnown RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.48□□□□□ -1.85
COPA-204ENST00000481522 LMO7Q8WWI1 1683 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 ARHGEF10O15013 1369 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 CHD9Q3L8U1 2897 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 BRWD1Q9NSI6 2320 aa3.48□□□□□ -1.85
COPA-204ENST00000481522 ANKHD1Q8IWZ3 2542 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 C4AP0C0L4 1744 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 ZNF644Q9H582 1327 aaPredicted RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 TMEM8BA6NDV4 472 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 LRRC72A6NJI9 287 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 C15orf62A8K5M9 175 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 FAM72CH0Y354 149 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 MITFO75030 526 aaPredicted RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 SOCS5O75159 536 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 ZNF217O75362 1048 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 SLC22A3O75751 556 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 PLGP00747 810 aaPredicted RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 CSH1P0DML2 217 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 CSH2P0DML3 217 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 TCEA1P23193 301 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 ANOS1P23352 680 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 HRH2P25021 359 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 GCH1P30793 250 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 SLC15A1P46059 708 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 MMP14P50281 582 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 RUNX1T1Q06455 604 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 SPOCK1Q08629 439 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 GAGE5Q13069 117 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 GAGE6Q13070 117 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 PRKG2Q13237 762 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 CUL4AQ13619 759 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 ACVR2BQ13705 512 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 KCNC3Q14003 757 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 IRF3Q14653 427 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 RILPL1Q5EBL4 403 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 SIRPB2Q5JXA9 342 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 STXBP5Q5T5C0 1151 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 FAM72AQ5TYM5 149 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 FAM72DQ6L9T8 149 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 C19orf48Q6RUI8 117 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 MEX3BQ6ZN04 569 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 Q75L30 129 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 NFE4Q86UQ8 179 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 FAM72BQ86X60 149 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 C1orf52Q8N6N3 182 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 RDM1Q8NG50 284 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 CD99L2Q8TCZ2 262 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 NSUN4Q96CB9 384 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 LINGO1Q96FE5 620 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 DACH2Q96NX9 599 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 DDOQ99489 341 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 CLMPQ9H6B4 373 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 ZNF334Q9HCZ1 680 aaPredicted RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 RCC2Q9P258 522 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 SUCLA2Q9P2R7 463 aaPredicted RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 ADD3Q9UEY8 706 aaKnown RBP3.47□□□□□ -1.85
COPA-204ENST00000481522 B3GALT5Q9Y2C3 310 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 METP08581 1390 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 PALLDQ8WX93 1383 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 MBD5Q9P267 1494 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 ZSWIM8A7E2V4 1837 aa3.47□□□□□ -1.85
COPA-204ENST00000481522 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
COPA-204ENST00000481522 ASXL3Q9C0F0 2248 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 A0A1W2PQ09 198 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 TMEM189-UBE2V1I3L0A0 370 aa3.46□□□□□ -1.86
COPA-204ENST00000481522 CTDSP2O14595 271 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms