RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 PPARGP37231 505 aaPredicted RBP13.86□□□□□ -0.19
ATG4B-218ENST00000479554 ITGA1P56199 1179 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 ACVR1Q04771 509 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
ATG4B-218ENST00000479554 FASTKD1Q53R41 847 aaKnown RBP13.86□□□□□ -0.19
ATG4B-218ENST00000479554 COLEC12Q5KU26 742 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 CPZQ66K79 652 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 FAM198BQ6UWH4 519 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 UNC5AQ6ZN44 842 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 CDHR3Q6ZTQ4 885 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 TRIM73Q86UV7 250 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 SYTL1Q8IYJ3 562 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 GPR135Q8IZ08 494 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 TEX19Q8NA77 164 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 GLIS1Q8NBF1 620 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 ZNF778Q96MU6 729 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 RHOXF2Q9BQY4 288 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 TSSK1BQ9BXA7 367 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 NLNQ9BYT8 704 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 TRIM55Q9BYV6 548 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 ANKZF1Q9H8Y5 726 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 OR6C2Q9NZP2 312 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 SNX7Q9UNH6 387 aa13.86□□□□□ -0.19
ATG4B-218ENST00000479554 HECTD1Q9ULT8 2610 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 BHMG1C9JSJ3 638 aaPredicted RBP13.85□□□□□ -0.19
ATG4B-218ENST00000479554 FGGP02679 453 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 HBQ1P09105 142 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 H2AFXP16104 143 aaPredicted RBP13.85□□□□□ -0.19
ATG4B-218ENST00000479554 CSE1LP55060 971 aaKnown RBP13.85□□□□□ -0.19
ATG4B-218ENST00000479554 FOXK1P85037 733 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 CHAF1BQ13112 559 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 DEFB110Q30KQ9 67 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 PTCHD3Q3KNS1 767 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 DNAJC21Q5F1R6 531 aaKnown RBP13.85□□□□□ -0.19
ATG4B-218ENST00000479554 AARS2Q5JTZ9 985 aaKnown RBP13.85□□□□□ -0.19
ATG4B-218ENST00000479554 LCN10Q6JVE6 187 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 ZNF534Q76KX8 674 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 PEX13Q92968 403 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 OR2A14Q96R47 310 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 PARD6BQ9BYG5 372 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 ACSS2Q9NR19 701 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 CATSPERZQ9NTU4 200 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 SPHK1Q9NYA1 384 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 ANAPC5Q9UJX4 755 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 RAB21Q9UL25 225 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 PLAGL1Q9UM63 463 aa13.85□□□□□ -0.19
ATG4B-218ENST00000479554 A0A0J9YY10 115 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 GOLGA6L10A0A0M3HER8 536 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 ISM1B1AKI9 464 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 C9J4A7 227 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 ZNF749O43361 778 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 ZSCAN5DPP0CG00 497 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 CCR7P32248 378 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 RPL22P35268 128 aaKnown RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 PTGIRP43119 386 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 BASP1P80723 227 aaKnown RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 HSPA14Q0VDF9 509 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 SEMA3AQ14563 771 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 SIX1Q15475 284 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 IGFBP7Q16270 282 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 CCNG2Q16589 344 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 C8orf74Q6P047 294 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 SLC22A15Q8IZD6 547 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 SGSM3Q96HU1 749 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 DPH2Q9BQC3 489 aaPredicted RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 ING2Q9H160 280 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 FAM60AQ9NP50 221 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 EIF2B3Q9NR50 452 aaKnown RBP13.84□□□□□ -0.19
ATG4B-218ENST00000479554 TCFL5Q9UL49 500 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 RELNP78509 3460 aa13.84□□□□□ -0.19
ATG4B-218ENST00000479554 OR2B3O76000 313 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 PDGFAP04085 211 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 RPN2P04844 631 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 APOA4P06727 396 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 CAPN1P07384 714 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 TPBGLP0DKB5 382 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 AGXTP21549 392 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 TTPAP49638 278 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 RAB28P51157 221 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 PGDP52209 483 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 KIR2DS3Q14952 304 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 NCF4Q15080 339 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 TMED2Q15363 201 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 ZIC1Q15915 447 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 PCID2Q5JVF3 399 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 FAM69BQ5VUD6 431 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 WDR93Q6P2C0 686 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 DRICH1Q6PGQ1 229 aaPredicted RBP13.83□□□□□ -0.2
ATG4B-218ENST00000479554 C4orf22Q6V702 233 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 GSTA5Q7RTV2 222 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 LKAAEAR1Q8TD35 194 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 ADAMTS17Q8TE56 1095 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 MAIP1Q8WWC4 291 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 ASZ1Q8WWH4 475 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 KRT12Q99456 494 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 C17orf62Q9BQA9 187 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 SLC25A23Q9BV35 468 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms