RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 TAF12Q16514 161 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 CFAP77Q6ZQR2 320 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 CAMKK1Q8N5S9 505 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 OR10A6Q8NH74 314 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 CENPIQ92674 756 aaPredicted RBP20.79■□□□□ 0.92
SDF4-206ENST00000478938 DEFB129Q9H1M3 183 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 CATSPERBQ9H7T0 1116 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 GORASP2Q9H8Y8 452 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 TMX2Q9Y320 296 aa20.79■□□□□ 0.92
SDF4-206ENST00000478938 BRCA1P38398 1863 aaKnown RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 SEC22BO75396 215 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 RPS6KA4O75676 772 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 IFNA16P05015 189 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 ALAS2P22557 587 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 HMGCLP35914 325 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 ARL2P36404 184 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 RGS6P49758 472 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 PER3P56645 1201 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 RIN1Q13671 783 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 GPR19Q15760 415 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 TBCEQ15813 527 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 ATP6AP1LQ52LC2 224 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 ZNF772Q68DY9 489 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 TMEM207Q6UWW9 146 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 TMPRSS11AQ6ZMR5 421 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 TLK2Q86UE8 772 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 RYBPQ8N488 228 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 C2CD4AQ8NCU7 369 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 MAGEB10Q96LZ2 347 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 PPA2Q9H2U2 334 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 NDRG4Q9ULP0 352 aaKnown RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 FZD10Q9ULW2 581 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 SIP14410 1827 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 MIA3Q5JRA6 1907 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 FGF4P08620 206 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 SLC10A3P09131 477 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 SUPT20HL2P0C7V6 817 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 CXCL8P10145 99 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 DGKQP52824 942 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 FLYWCH1Q4VC44 716 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 CARD16Q5EG05 197 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 KDELC1Q6UW63 502 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 VANGL1Q8TAA9 524 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 PDCD2LQ9BRP1 358 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 MCUBQ9NWR8 336 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 GMEB2Q9UKD1 530 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 ELF5Q9UKW6 265 aaPredicted RBP20.78■□□□□ 0.92
SDF4-206ENST00000478938 NEUROG3Q9Y4Z2 214 aa20.78■□□□□ 0.92
SDF4-206ENST00000478938 DFNA5O60443 496 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 ICAM1P05362 532 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 CPT1AP50416 773 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 CELF3Q5SZQ8 465 aaKnown RBP20.77■□□□□ 0.92
SDF4-206ENST00000478938 RGMBQ6NW40 437 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 PODNQ7Z5L7 613 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 ZNF680Q8NEM1 530 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 ING3Q9NXR8 418 aa20.77■□□□□ 0.92
SDF4-206ENST00000478938 DNMT3AQ9Y6K1 912 aaPredicted RBP20.77■□□□□ 0.92
SDF4-206ENST00000478938 FAM234BA2RU67 622 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 ERI2A8K979 691 aaKnown RBP20.77■□□□□ 0.91
SDF4-206ENST00000478938 PTHP01270 115 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 ITGB1P05556 798 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 KELP23276 732 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 CHMP24386 653 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 HOXA9P31269 272 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 TGM4P49221 684 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 PROX2Q3B8N5 592 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 C6orf132Q5T0Z8 1188 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 SLC35F1Q5T1Q4 408 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 CPZQ66K79 652 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 TEX261Q6UWH6 196 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 ISCA2Q86U28 154 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 PIM3Q86V86 326 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 ZNF548Q8NEK5 533 aaPredicted RBP20.77■□□□□ 0.91
SDF4-206ENST00000478938 OR52K2Q8NGK3 314 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 IKZF5Q9H5V7 419 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 U3KQ87 197 aa20.77■□□□□ 0.91
SDF4-206ENST00000478938 TRAV19A0A0A6YYK7 116 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 CRCPO75575 148 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 GTF2H3Q13889 308 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 GNASQ5JWF2 1037 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 FAM182BQ5T319 152 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 SHQ1Q6PI26 577 aaKnown RBP20.76■□□□□ 0.91
SDF4-206ENST00000478938 SPATA19Q7Z5L4 167 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 TIGD4Q8IY51 512 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 ZNF366Q8N895 744 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 ENKURQ8TC29 256 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 PROKR1Q8TCW9 393 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 CCDC115Q96NT0 180 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 SPNS1Q9H2V7 528 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 IFT22Q9H7X7 185 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 ACKR2O00590 384 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 MSCO60682 206 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 WDR47O94967 919 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 PITX1P78337 314 aaPredicted RBP20.76■□□□□ 0.91
SDF4-206ENST00000478938 ELP6Q0PNE2 266 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 PFKFB4Q16877 469 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 PCID2Q5JVF3 399 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 ZPBP2Q6X784 338 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 ENTHD1Q8IYW4 607 aa20.76■□□□□ 0.91
SDF4-206ENST00000478938 OR52H1Q8NGJ2 320 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms