RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, human

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFF4-208	ENST00000478588	POU5F1	Q01860	360 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	SPAG1	Q07617	926 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	GOLGA8F	Q08AF8	430 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM27E3	Q08E93	113 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	ALCAM	Q13740	583 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	IL17A	Q16552	155 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	WHAMMP3	Q1A5X7	153 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	FILIP1L	Q4L180	1135 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	XKR4	Q5GH76	650 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	GLRA4	Q5JXX5	417 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	RETSAT	Q6NUM9	610 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	STXBP4	Q6ZWJ1	553 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	APTX	Q7Z2E3	356 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	HAUS6	Q7Z4H7	955 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	TMTC1	Q8IUR5	882 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	CD302	Q8IX05	232 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	DAW1	Q8N136	415 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	TMEM161B	Q8NDZ6	487 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM216A	Q8WUB2	273 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	RAD54L	Q92698	747 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	HVCN1	Q96D96	273 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	PLIN2	Q99541	437 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	C1QTNF4	Q9BXJ3	329 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	PARD6B	Q9BYG5	372 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	MFSD1	Q9H3U5	465 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	ZHX3	Q9H4I2	956 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	SLC32A1	Q9H598	525 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	POMK	Q9H5K3	350 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	RPF1	Q9H9Y2	349 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	MIOS	Q9NXC5	875 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	CWC15	Q9P013	229 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	LIMA1	Q9UHB6	759 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	UBQLN1	Q9UMX0	589 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	EXOC7	Q9UPT5	735 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	NFE2L3	Q9Y4A8	694 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	PCDHGB3	Q9Y5G1	929 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	MYH9	P35579	1960 aa	Known RBP	4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	PTPRS	Q13332	1948 aa		4.23	□□□□□ -1.73
AFF4-208	ENST00000478588	CLUH	O75153	1309 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	XIRP2	A4UGR9	3374 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM90A7P	A6NKC0	464 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM90A22P	A8MWA6	464 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM90A12P	A8MX19	464 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FAM90A23P	A8MXZ1	464 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	C2CD4D	B7Z1M9	353 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PRRG1	O14668	218 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	OGT	O15294	1046 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	POLR2D	O15514	142 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	KLK10	O43240	276 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	KIF1C	O43896	1103 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	KIF5C	O60282	957 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TCEA3	O75764	348 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PIGR	P01833	764 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	GAP43	P17677	238 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	CYP3A5	P20815	502 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	SP100	P23497	879 aa	Predicted RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	OAS2	P29728	719 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TTK	P33981	857 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	ZNF131	P52739	623 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	HNRNPH2	P55795	449 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	ADORA2A-AS1	P86434	159 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TRAF2	Q12933	501 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TDG	Q13569	410 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	KARS	Q15046	597 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	UPP1	Q16831	310 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PPM1L	Q5SGD2	360 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TPGS2	Q68CL5	300 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TYW3	Q6IPR3	259 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588		Q6ZTC4	211 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	MOB3C	Q70IA8	216 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	H1FNT	Q75WM6	255 aa	Predicted RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	MTSS1L	Q765P7	747 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PCGF5	Q86SE9	256 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PATL1	Q86TB9	770 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	CCDC65	Q8IXS2	484 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	ELMOD1	Q8N336	334 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	NKAP	Q8N5F7	415 aa	Known RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	OTUD6B	Q8N6M0	293 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	PDILT	Q8N807	584 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	LEMD2	Q8NC56	503 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	BEST2	Q8NFU1	509 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	LNX1	Q8TBB1	728 aa	Predicted RBP	4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	RTP4	Q96DX8	246 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	GSDMA	Q96QA5	445 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	REEP2	Q9BRK0	252 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FUT8	Q9BYC5	575 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	CUEDC2	Q9H467	287 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	ST6GALNAC4	Q9H4F1	302 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	ASB7	Q9H672	318 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	VIPAS39	Q9H9C1	493 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	MAGEF1	Q9HAY2	307 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	POLD4	Q9HCU8	107 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TMEM51	Q9NW97	253 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	MTRR	Q9UBK8	725 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	FBXW11	Q9UKB1	542 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	TBX20	Q9UMR3	447 aa		4.22	□□□□□ -1.73
AFF4-208	ENST00000478588	MUC3A	Q02505	3323 aa		4.21	□□□□□ -1.73
AFF4-208	ENST00000478588	NOTCH4	Q99466	2003 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms