RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 SLC38A9Q8NBW4 561 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 OR1L3Q8NH93 324 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 CT55Q8WUE5 264 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 ANP32BQ92688 251 aaKnown RBP21.02■□□□□ 0.96
COL9A3-211ENST00000477612 TCTN2Q96GX1 697 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 GPR87Q9BY21 358 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 STARD5Q9NSY2 213 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 PCYOX1Q9UHG3 505 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 TUBD1Q9UJT1 453 aa21.02■□□□□ 0.96
COL9A3-211ENST00000477612 A0A0J9YY10 115 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 H3BMH7 237 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 USP1O94782 785 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 FAM87AP0C7U9 286 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 CD9P21926 228 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 GPS2Q13227 327 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 RNASEH2BQ5TBB1 312 aaKnown RBP21.01■□□□□ 0.95
COL9A3-211ENST00000477612 CASC4Q6P4E1 433 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 LMNTD2Q8IXW0 634 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 C19orf47Q8N9M1 422 aaKnown RBP21.01■□□□□ 0.95
COL9A3-211ENST00000477612 LINC01555Q8NAE3 123 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 TRIM56Q9BRZ2 755 aaKnown RBP21.01■□□□□ 0.95
COL9A3-211ENST00000477612 FAM60AQ9NP50 221 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 INTS10Q9NVR2 710 aaKnown RBP21.01■□□□□ 0.95
COL9A3-211ENST00000477612 SERTAD3Q9UJW9 196 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 PLAGL1Q9UM63 463 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 VPS9D1Q9Y2B5 631 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 MRFAP1Q9Y605 127 aa21.01■□□□□ 0.95
COL9A3-211ENST00000477612 TLN1Q9Y490 2541 aaKnown RBP21.01■□□□□ 0.95
COL9A3-211ENST00000477612 TMEM150CB9EJG8 249 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 GOLGA8MH3BSY2 632 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 CREG1O75629 220 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 ATP5DP30049 168 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 FMO4P31512 558 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 RORAP35398 523 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 CCR10P46092 362 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 IZUMO3Q5VZ72 239 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 ZNF605Q86T29 641 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 HOOK3Q86VS8 718 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 DSELQ8IZU8 1212 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 OTUD6BQ8N6M0 293 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 OR2L8Q8NGY9 312 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 RAD51AP1Q96B01 352 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 ZNF669Q96BR6 464 aaPredicted RBP21■□□□□ 0.95
COL9A3-211ENST00000477612 DDX47Q9H0S4 455 aaKnown RBP21■□□□□ 0.95
COL9A3-211ENST00000477612 CRYL1Q9Y2S2 319 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 CCDC88CQ9P219 2028 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 ZNF462Q96JM2 2506 aa21■□□□□ 0.95
COL9A3-211ENST00000477612 MEN1O00255 615 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 DNALI1O14645 258 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-211ENST00000477612 RASGRF2O14827 1237 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 NIPSNAP2O75323 286 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 MATN4O95460 622 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 C1orf105O95561 183 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 S1PR4O95977 384 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 KLK3P07288 261 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-211ENST00000477612 PRKAR1AP10644 381 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 PKMP14618 531 aaKnown RBP20.99■□□□□ 0.95
COL9A3-211ENST00000477612 PTGIRP43119 386 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 ITGA1P56199 1179 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 POLE2P56282 527 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 PTK6Q13882 451 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 ZIC1Q15915 447 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 PRAMEF17Q5VTA0 474 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 FAM199XQ6PEV8 388 aaPredicted RBP20.99■□□□□ 0.95
COL9A3-211ENST00000477612 CREG2Q8IUH2 290 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 CFAP61Q8NHU2 1237 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 SEC14L1Q92503 715 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 SLC22A18Q96BI1 424 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 KLHL25Q9H0H3 589 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 FAM169AQ9Y6X4 670 aa20.99■□□□□ 0.95
COL9A3-211ENST00000477612 ANKRD12Q6UB98 2062 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 GCN1Q92616 2671 aaKnown RBP20.98■□□□□ 0.95
COL9A3-211ENST00000477612 ISM1B1AKI9 464 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 PRICKLE3O43900 615 aaPredicted RBP20.98■□□□□ 0.95
COL9A3-211ENST00000477612 KATNA1O75449 491 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 FURINP09958 794 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 RAB40ALP0C0E4 278 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 IVDP26440 423 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 PTPN4P29074 926 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 CCNFP41002 786 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 PPP1R7Q15435 360 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 C16orf46Q6P387 395 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 TTC23LQ6PF05 361 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 PCGF5Q86SE9 256 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 TRIM73Q86UV7 250 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 DNAJC22Q8N4W6 341 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 GSDMBQ8TAX9 411 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 HMGCLL1Q8TB92 370 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 APOBEC4Q8WW27 367 aaKnown RBP20.98■□□□□ 0.95
COL9A3-211ENST00000477612 RAB11FIP5Q9BXF6 653 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 SLC25A18Q9H1K4 315 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 PCMTD2Q9NV79 361 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 IL1RAPL1Q9NZN1 696 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 KLHL42Q9P2K6 505 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 FARSAQ9Y285 508 aaKnown RBP20.98■□□□□ 0.95
COL9A3-211ENST00000477612 NFS1Q9Y697 457 aa20.98■□□□□ 0.95
COL9A3-211ENST00000477612 HELZ2Q9BYK8 2649 aaKnown RBP20.98■□□□□ 0.95
COL9A3-211ENST00000477612 E7EQ34 232 aa20.97■□□□□ 0.95
COL9A3-211ENST00000477612 FKBP9O95302 570 aa20.97■□□□□ 0.95
COL9A3-211ENST00000477612 HBQ1P09105 142 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms