RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 C2orf73Q8N5S3 287 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CLDN19Q8N6F1 224 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 BCORP1Q8N888 145 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CCDC110Q8TBZ0 833 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 COG1Q8WTW3 980 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 HEXDCQ8WVB3 486 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ELMO1Q92556 727 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 DLG3Q92796 817 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 LRRC45Q96CN5 670 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 VPS50Q96JG6 964 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 LINC00615Q96LM1 132 aaPredicted RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 QKIQ96PU8 341 aaKnown RBP eCLIP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 OR2A14Q96R47 310 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 FERMT1Q9BQL6 677 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 LHPPQ9H008 270 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 OR52A5Q9H2C5 316 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 TFB2MQ9H5Q4 396 aaKnown RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 C10orf88Q9H8K7 445 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 SPTLC3Q9NUV7 552 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNHIT6Q9NWK9 470 aaKnown RBP6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 SPHK1Q9NYA1 384 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 ZDHHC3Q9NYG2 299 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 SMARCAL1Q9NZC9 954 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 CIDEBQ9UHD4 219 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 PLCL2Q9UPR0 1127 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 KLHL20Q9Y2M5 609 aa6.43□□□□□ -1.38
RTFDC1-206ENST00000477485 C17orf113A0A1B0GUU1 675 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 A0A1B0GX78 115 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 DYTNA2CJ06 578 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CCL21O00585 134 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MAP2K7O14733 419 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 SGTAO43765 313 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 KRT38O76015 456 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 STK10O94804 968 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 PRSS56P0CW18 603 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MAGP20916 626 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 COMTP21964 271 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MMP11P24347 488 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ACRV1P26436 265 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 PSMB4P28070 264 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 RBL1P28749 1068 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ARHGAP25P42331 645 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CDKN2BP42772 138 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 OR1D4P47884 311 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CD151P48509 253 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 XIAPP98170 497 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 SRSF11Q05519 484 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 SPARCL1Q14515 664 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 VWA2Q5GFL6 755 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 TFDP3Q5H9I0 405 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CRB2Q5IJ48 1285 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 B3GNTL1Q67FW5 361 aaPredicted RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CAVIN1Q6NZI2 390 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MRPL14Q6P1L8 145 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ISLR2Q6UXK2 745 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ARHGEF18Q6ZSZ5 1173 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 LUZP1Q86V48 1076 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 SERPINA9Q86WD7 417 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 VSIG1Q86XK7 387 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 RHOT2Q8IXI1 618 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 TTC29Q8NA56 475 aaPredicted RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CATSPER1Q8NEC5 780 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CFAP61Q8NHU2 1237 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 IQCDQ96DY2 449 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 DNAJC1Q96KC8 554 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 LURAP1Q96LR2 239 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ALS2CR12Q96Q35 445 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 VAT1Q99536 393 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CRB3Q9BUF7 120 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 YIPF2Q9BWQ6 316 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 HEMGNQ9BXL5 484 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 GBA3Q9H227 469 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MRM3Q9HC36 420 aaKnown RBP6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 ZNF160Q9HCG1 818 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 EURLQ9NYK6 297 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 PLA2G3Q9NZ20 509 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 IFNKQ9P0W0 207 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 PTGFRNQ9P2B2 879 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 IMPACTQ9P2X3 320 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CTSFQ9UBX1 484 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 POLG2Q9UHN1 485 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 TRHDEQ9UKU6 1024 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MAU2Q9Y6X3 613 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 MED13LQ71F56 2210 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 POLQO75417 2590 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 F8P00451 2351 aa6.42□□□□□ -1.38
RTFDC1-206ENST00000477485 CACNA1CQ13936 2221 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FBN2P35556 2912 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 OTOGQ6ZRI0 2925 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 POLEQ07864 2286 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 HACD1B0YJ81 288 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 SOCS6O14544 535 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 DSCR3O14972 297 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 KCNN4O15554 427 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 UNC5CO95185 931 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 FTH1P02794 183 aa6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 PTMAP06454 111 aaKnown RBP6.41□□□□□ -1.38
RTFDC1-206ENST00000477485 STSP08842 583 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms