RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 IL17FQ96PD4 163 aa20.46■□□□□ 0.87
LIME1-204ENST00000476183 FBXO6Q9NRD1 293 aaPredicted RBP20.46■□□□□ 0.87
LIME1-204ENST00000476183 KPNA5O15131 536 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 PFDN6O15212 129 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 SCRG1O75711 98 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 PKMP14618 531 aaKnown RBP20.45■□□□□ 0.86
LIME1-204ENST00000476183 DLSTP36957 453 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 RAB28P51157 221 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 DHX9Q08211 1270 aaKnown RBP20.45■□□□□ 0.86
LIME1-204ENST00000476183 THOC5Q13769 683 aaKnown RBP20.45■□□□□ 0.86
LIME1-204ENST00000476183 LONRF1Q17RB8 773 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 CCSMST1Q4G0I0 132 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 CDHR3Q6ZTQ4 885 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 SLC38A9Q8NBW4 561 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 OR8K5Q8NH50 307 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 OR1L3Q8NH93 324 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 STARD8Q92502 1023 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 EFHD1Q9BUP0 239 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 FAM60AQ9NP50 221 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 LHX9Q9NQ69 397 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 C20orf96Q9NUD7 363 aaPredicted RBP20.45■□□□□ 0.86
LIME1-204ENST00000476183 INTS10Q9NVR2 710 aaKnown RBP20.45■□□□□ 0.86
LIME1-204ENST00000476183 PADI1Q9ULC6 663 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 FAM169AQ9Y6X4 670 aa20.45■□□□□ 0.86
LIME1-204ENST00000476183 ZNF462Q96JM2 2506 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 KRT87PA6NCN2 255 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 TMEM150CB9EJG8 249 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 H3BMM5 538 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 HCRTR1O43613 425 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 C1orf105O95561 183 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 RPN2P04844 631 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 MSL3P1P0C860 447 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 CHRM3P20309 590 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 SLC1A2P43004 574 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 BDKRB1P46663 353 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 DR1Q01658 176 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 ZNF549Q6P9A3 640 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 HOOK3Q86VS8 718 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 TMEM126BQ8IUX1 230 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 IGDCC3Q8IVU1 814 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 FAM20CQ8IXL6 584 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 C2orf73Q8N5S3 287 aaPredicted RBP20.44■□□□□ 0.86
LIME1-204ENST00000476183 C19orf47Q8N9M1 422 aaKnown RBP20.44■□□□□ 0.86
LIME1-204ENST00000476183 CT55Q8WUE5 264 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 PWWP2AQ96N64 755 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 SLC30A3Q99726 388 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 TRIM51Q9BSJ1 452 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 LATS2Q9NRM7 1088 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 TSR3Q9UJK0 312 aaKnown RBP20.44■□□□□ 0.86
LIME1-204ENST00000476183 MED16Q9Y2X0 877 aa20.44■□□□□ 0.86
LIME1-204ENST00000476183 A0A0J9YY10 115 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 ISM1B1AKI9 464 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 KDM1AO60341 852 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 CPNE3O75131 537 aaKnown RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 MT-ND3P03897 115 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 CCNYL3P0C7X3 344 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 PRKAR1AP10644 381 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 PGAM1P18669 254 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 OAS2P29728 719 aaKnown RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 MPP1Q00013 466 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 GPS2Q13227 327 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 KIR2DS3Q14952 304 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 ACSBG2Q5FVE4 666 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 ATP1A1-AS1Q5TC04 95 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 FAM199XQ6PEV8 388 aaPredicted RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 CNSTQ6PJW8 725 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 SYDE1Q6ZW31 735 aaPredicted RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 PCGF5Q86SE9 256 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 TAX1BP1Q86VP1 789 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 ZNF843Q8N446 348 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.43■□□□□ 0.86
LIME1-204ENST00000476183 GSDMBQ8TAX9 411 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 SKA2Q8WVK7 121 aaPredicted RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 RUFY1Q96T51 708 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 EBNA1BP2Q99848 306 aaKnown RBP20.43■□□□□ 0.86
LIME1-204ENST00000476183 FANCEQ9HB96 536 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 SYTL2Q9HCH5 934 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 VPS9D1Q9Y2B5 631 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 SPTA1P02549 2419 aa20.43■□□□□ 0.86
LIME1-204ENST00000476183 RASGRF2O14827 1237 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 TTI1O43156 1089 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 FAM87AP0C7U9 286 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 CD9P21926 228 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 GABRA4P48169 554 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 CLCN7P51798 805 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 CDC20Q12834 499 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 DNASE1L3Q13609 305 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 CRYMQ14894 314 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 SLC5A12Q1EHB4 618 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 HSP90AA5PQ58FG0 334 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 ZBTB2Q8N680 514 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 OR2L8Q8NGY9 312 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 GIMAP7Q8NHV1 300 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 RUNDC3BQ96NL0 473 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 PLAC1Q9HBJ0 212 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 IARS2Q9NSE4 1012 aaKnown RBP20.42■□□□□ 0.86
LIME1-204ENST00000476183 FBXO5Q9UKT4 447 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 PCDHB3Q9Y5E6 796 aa20.42■□□□□ 0.86
LIME1-204ENST00000476183 CCDC188H7C350 402 aa20.41■□□□□ 0.86
LIME1-204ENST00000476183 TP73O15350 636 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms