RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 POMPQ9Y244 141 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 PCDHGA7Q9Y5G6 932 aa17.53■□□□□ 0.4
VARS2-206ENST00000473916 A0A1W2PQU0 124 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 LIN7AO14910 233 aaPredicted RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 VEGFDO43915 354 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 NRP2O60462 931 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 PSMG1O95456 288 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 CATP04040 527 aaKnown RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 IMPA1P29218 277 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 IL12AP29459 219 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 ADPRHP54922 357 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 YBX1P67809 324 aaKnown RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 NAE1Q13564 534 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 GSTA3Q16772 222 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 AP5B1Q2VPB7 878 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 TRMT5Q32P41 509 aaKnown RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 TMEM31Q5JXX7 168 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 AGTRAPQ6RW13 159 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 BNC2Q6ZN30 1099 aaPredicted RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 TP53I13Q8NBR0 393 aaPredicted RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 HIPK4Q8NE63 616 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 KCNV2Q8TDN2 545 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 OR4K3Q96R72 315 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 NRTNQ99748 197 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 SLC52A3Q9NQ40 469 aa17.52■□□□□ 0.4
VARS2-206ENST00000473916 POLR3HQ9Y535 204 aaPredicted RBP17.52■□□□□ 0.4
VARS2-206ENST00000473916 PLRG1O43660 514 aaKnown RBP17.52■□□□□ 0.39
VARS2-206ENST00000473916 ULK1O75385 1050 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 C1orf105O95561 183 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 PDYNP01213 254 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 DNTTP04053 509 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 FUCA1P04066 466 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 CD22P20273 847 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 PPP2CBP62714 309 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 PPP2CAP67775 309 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 CCNIQ14094 377 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 SDE2Q6IQ49 451 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 RALGPS2Q86X27 583 aaPredicted RBP17.52■□□□□ 0.39
VARS2-206ENST00000473916 ENDOVQ8N8Q3 282 aaKnown RBP17.52■□□□□ 0.39
VARS2-206ENST00000473916 FAM156AQ8NDB6 213 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 OR2L2Q8NH16 312 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 VPS33AQ96AX1 596 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 LINC00615Q96LM1 132 aaPredicted RBP17.52■□□□□ 0.39
VARS2-206ENST00000473916 BRINP2Q9C0B6 783 aa17.52■□□□□ 0.39
VARS2-206ENST00000473916 ASPDHA6ND91 283 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 E7ENX8 843 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 E7EQ34 232 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 CHUKO15111 745 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 G6PDP11413 515 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 XRCC1P18887 633 aaPredicted RBP17.51■□□□□ 0.39
VARS2-206ENST00000473916 POU3F3P20264 500 aaPredicted RBP17.51■□□□□ 0.39
VARS2-206ENST00000473916 RPL38P63173 70 aaKnown RBP17.51■□□□□ 0.39
VARS2-206ENST00000473916 STX5Q13190 355 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 PIGGQ5H8A4 983 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 THOC6Q86W42 341 aaKnown RBP17.51■□□□□ 0.39
VARS2-206ENST00000473916 RGL4Q8IZJ4 473 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 RPLP0P6Q8NHW5 317 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 USP7Q93009 1102 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 ACTL8Q9H568 366 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 IL1RL2Q9HB29 575 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 MRGBPQ9NV56 204 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 MAP10Q9P2G4 905 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 PSMD13Q9UNM6 376 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 GPR34Q9UPC5 381 aa17.51■□□□□ 0.39
VARS2-206ENST00000473916 MGAT4DA6NG13 374 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 RNGTTO60942 597 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 RSL1D1O76021 490 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 ATXN3P54252 364 aaPredicted RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 SESN3P58005 492 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 PSME3P61289 254 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 GRSF1Q12849 480 aaKnown RBP eCLIP17.5■□□□□ 0.39
VARS2-206ENST00000473916 CHIT1Q13231 466 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 ZRSR2Q15696 482 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 ZNF423Q2M1K9 1284 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TMEM259Q4ZIN3 620 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 IL23RQ5VWK5 629 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 BLOC1S3Q6QNY0 202 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TMEM92Q6UXU6 159 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 HM13Q8TCT9 377 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 FAM131CQ96AQ9 280 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 CCDC138Q96M89 665 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 FOPNLQ96NB1 174 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 CCT7Q99832 543 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TEX101Q9BY14 249 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 ACPTQ9BZG2 426 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 WDR26Q9H7D7 661 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 GMPR2Q9P2T1 348 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 PRPF19Q9UMS4 504 aaKnown RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 SH2B3Q9UQQ2 575 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 SOX1O00570 391 aaPredicted RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 MBTPS2O43462 519 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 LATO43561 262 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 SLC2A4P14672 509 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TCN1P20061 433 aaPredicted RBP17.5■□□□□ 0.39
VARS2-206ENST00000473916 ACADLP28330 430 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 HALP42357 657 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TFF2Q03403 129 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 TRIM46Q7Z4K8 759 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 PHC3Q8NDX5 983 aa17.5■□□□□ 0.39
VARS2-206ENST00000473916 PROKR1Q8TCW9 393 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms