RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 CEP97Q8IW35 865 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 LSMEM2Q8N112 164 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 FBXO39Q8N4B4 442 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 RCBTB1Q8NDN9 531 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 OR9A1PQ8NGU1 263 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 OR2L8Q8NGY9 312 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 HMGCLL1Q8TB92 370 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 SLC44A1Q8WWI5 657 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 ANKRD7Q92527 254 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 GATA6Q92908 595 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 TWSG1Q9GZX9 223 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 GPAMQ9HCL2 828 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 SPATA7Q9P0W8 599 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 POMT2Q9UKY4 750 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 SATB2Q9UPW6 733 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 LOXL2Q9Y4K0 774 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 IKBKGQ9Y6K9 419 aa20.14■□□□□ 0.81
TOP3A-204ENST00000472959 COL27A1Q8IZC6 1860 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 PIPSLA2A3N6 862 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 GSAPA4D1B5 854 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 A8MU76 341 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 INHBAP08476 426 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 MLLT3P42568 568 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 PPP1CAP62136 330 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 GABREP78334 506 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 KIR2DS3Q14952 304 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 ARHGAP19Q14CB8 494 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 C3orf38Q5JPI3 329 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 IGF2-ASQ6U949 168 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 UBE2R2Q712K3 238 aaPredicted RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 SPNS2Q8IVW8 549 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 MCOLN3Q8TDD5 553 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 KLHL6Q8WZ60 621 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 SLC22A18Q96BI1 424 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 MRRFQ96E11 262 aaKnown RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 NRTNQ99748 197 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 SLC12A9Q9BXP2 914 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 ZNF768Q9H5H4 540 aaKnown RBP20.13■□□□□ 0.81
TOP3A-204ENST00000472959 ACTR10Q9NZ32 417 aa20.13■□□□□ 0.81
TOP3A-204ENST00000472959 A0A1W2PNU3 283 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 KIF1CO43896 1103 aaKnown RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 MPOP05164 745 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 JMJD7P0C870 316 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CYP2A7P20853 494 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CRABP2P29373 138 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 PRDX3P30048 256 aaKnown RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 MSH2P43246 934 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 SERPINB9P50453 376 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 KPNA2P52292 529 aaKnown RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 PGGT1BP53609 377 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 RAB10P61026 200 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 VSNL1P62760 191 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 ZKSCAN8Q15776 578 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 UAP1Q16222 522 aaPredicted RBP20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CYP2A13Q16696 494 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 ERCC6LQ2NKX8 1250 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CCSMST1Q4G0I0 132 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 ANKS6Q68DC2 871 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 TMEM207Q6UWW9 146 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 KMT5CQ86Y97 462 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 MAP3K3Q99759 626 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CAB39LQ9H9S4 337 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 PARVBQ9HBI1 364 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 C1GALT1Q9NS00 363 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 CIDEBQ9UHD4 219 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 ZNF180Q9UJW8 692 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 AK5Q9Y6K8 562 aa20.12■□□□□ 0.81
TOP3A-204ENST00000472959 ZNF839A8K0R7 811 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 B4E171 279 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 DXOO77932 396 aaKnown RBP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 WISP3O95389 354 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 TUBBP07437 444 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 RBMS1P29558 406 aaKnown RBP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 TSPAN7P41732 249 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 SLC29A2Q14542 456 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 ZNF460Q14592 562 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 SPESP1Q6UW49 350 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 TAOK1Q7L7X3 1001 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 CCDC91Q7Z6B0 441 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 LINC01555Q8NAE3 123 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 UHMK1Q8TAS1 419 aaKnown RBP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 DENND1AQ8TEH3 1009 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 IL17FQ96PD4 163 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 PAFAH2Q99487 392 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 PKP4Q99569 1192 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 PITPNM3Q9BZ71 974 aa20.11■□□□□ 0.81
TOP3A-204ENST00000472959 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 V9GYY5 206 aaPredicted RBP20.11■□□□□ 0.81
TOP3A-204ENST00000472959 IGHV5-51A0A0C4DH38 117 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 EXOC1LA0A1B0GW35 172 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 POC1B-GALNT4F8VUJ3 575 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 PHGDHO43175 533 aaKnown RBP20.1■□□□□ 0.81
TOP3A-204ENST00000472959 ZBTB11O95625 1053 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-204ENST00000472959 ENO2P09104 434 aaPredicted RBP20.1■□□□□ 0.81
TOP3A-204ENST00000472959 ERGP11308 486 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 NELFEP18615 380 aaKnown RBP20.1■□□□□ 0.81
TOP3A-204ENST00000472959 CDH3P22223 829 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 CNTFP26441 200 aa20.1■□□□□ 0.81
TOP3A-204ENST00000472959 MROH9Q5TGP6 573 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms