RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR2B3O76000 313 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 SLCO2B1O94956 709 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 AOAHP28039 575 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 PEBP1P30086 187 aaKnown RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 PTGIRP43119 386 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 CD97P48960 835 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 CSE1LP55060 971 aaKnown RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 HSPA14Q0VDF9 509 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 CHAF1BQ13112 559 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 SLC5A12Q1EHB4 618 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 AARS2Q5JTZ9 985 aaKnown RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 RHBDD2Q6NTF9 364 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 LDB1Q86U70 411 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 DNAJC22Q8N4W6 341 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 ZBTB2Q8N680 514 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 N4BP2L2Q92802 583 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 TREX1Q9NSU2 369 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 CATSPERZQ9NTU4 200 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 MARCH4Q9P2E8 410 aaPredicted RBP14.75□□□□□ -0.05
VTI1A-203ENST00000472892 ANAPC5Q9UJX4 755 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 PLAGL1Q9UM63 463 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 PLAAQ9Y263 795 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 ZKSCAN5Q9Y2L8 839 aa14.75□□□□□ -0.05
VTI1A-203ENST00000472892 FLNCQ14315 2725 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 HECTD1Q9ULT8 2610 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CLEC18AA5D8T8 446 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 ISM1B1AKI9 464 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 AP3B1O00203 1094 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 PRMT5O14744 637 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CD3EAPO15446 510 aaKnown RBP14.74□□□□□ -0.05
VTI1A-203ENST00000472892 KLF7O75840 302 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-203ENST00000472892 TMEM63AO94886 807 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 APOA4P06727 396 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CBSLP0DN79 551 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CBSP35520 551 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 NPY2RP49146 381 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 TTPAP49638 278 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 RAB28P51157 221 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 PGDP52209 483 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 MLLT10P55197 1068 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 SESN2P58004 480 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-203ENST00000472892 GRB7Q14451 532 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CLEC18BQ6UXF7 455 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 UNC5DQ6UXZ4 953 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 MED25Q71SY5 747 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 TMEM102Q8N9M5 508 aaPredicted RBP14.74□□□□□ -0.05
VTI1A-203ENST00000472892 LINC01555Q8NAE3 123 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 CLEC18CQ8NCF0 446 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 LKAAEAR1Q8TD35 194 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 C17orf62Q9BQA9 187 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 IL22Q9GZX6 179 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 P2RY12Q9H244 342 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 PCDHGB7Q9Y5F8 929 aa14.74□□□□□ -0.05
VTI1A-203ENST00000472892 C9J4A7 227 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 RPN2P04844 631 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 CTSBP07858 339 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 CD9P21926 228 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 PKLRP30613 574 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 CRADDP78560 199 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 UBAP2LQ14157 1087 aaKnown RBP14.73□□□□□ -0.05
VTI1A-203ENST00000472892 DEFB110Q30KQ9 67 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 TLDC1Q6P9B6 456 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 KRT222Q8N1A0 295 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 MPP5Q8N3R9 675 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 PROKR1Q8TCW9 393 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 MAIP1Q8WWC4 291 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 GBP5Q96PP8 586 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 LZTFL1Q9NQ48 299 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 BFARQ9NZS9 450 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 PLCL2Q9UPR0 1127 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 PADI2Q9Y2J8 665 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 SEC16AO15027 2179 aa14.73□□□□□ -0.05
VTI1A-203ENST00000472892 CYSRT1A8MQ03 144 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 ZSCAN9O15535 394 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-203ENST00000472892 FGGP02679 453 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 CD63P08962 238 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 CCDC175P0C221 793 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 RPS3P23396 243 aaKnown RBP eCLIP14.72□□□□□ -0.05
VTI1A-203ENST00000472892 NMBRP28336 390 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 GCGRP47871 477 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 KCNJ1P48048 391 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 DCDP81605 110 aaKnown RBP14.72□□□□□ -0.05
VTI1A-203ENST00000472892 SSPNQ14714 243 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 MLIPQ5VWP3 458 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 LRRC8BQ6P9F7 803 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 GSTA5Q7RTV2 222 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 LRRC6Q86X45 466 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 DCUN1D3Q8IWE4 304 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 ZNF655Q8N720 491 aaPredicted RBP14.72□□□□□ -0.05
VTI1A-203ENST00000472892 FDCSPQ8NFU4 85 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 OR2L8Q8NGY9 312 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 CFAP61Q8NHU2 1237 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 SLC22A18Q96BI1 424 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 PANX3Q96QZ0 392 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 KIFC1Q9BW19 673 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 EURLQ9NYK6 297 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 SRPK3Q9UPE1 567 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 ZNF451Q9Y4E5 1061 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
VTI1A-203ENST00000472892 NBASA2RRP1 2371 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms