RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 PCYOX1LQ8NBM8 494 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 NAXEQ8NCW5 288 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 FCAMRQ8WWV6 532 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 SKA1Q96BD8 255 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 OXNAD1Q96HP4 312 aaPredicted RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 APOBEC3GQ9HC16 384 aaKnown RBP5.09□□□□□ -1.59
CCDC39-202ENST00000471307 TRPC7Q9HCX4 862 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 SLC52A3Q9NQ40 469 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 EHD2Q9NZN4 543 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 YIPF1Q9Y548 306 aa5.09□□□□□ -1.59
CCDC39-202ENST00000471307 BRCA1P38398 1863 aaKnown RBP5.09□□□□□ -1.6
CCDC39-202ENST00000471307 LTBP1Q14766 1721 aa5.09□□□□□ -1.6
CCDC39-202ENST00000471307 KIAA1551Q9HCM1 1747 aa5.09□□□□□ -1.6
CCDC39-202ENST00000471307 RAD50Q92878 1312 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 IGKV3D-15A0A087WSY6 115 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 ANTXRLA6NF34 631 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 HHLA1C9JL84 531 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 SMAD9O15198 467 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 PPIP5K2O43314 1243 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 IDH1O75874 414 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 WISP2O76076 250 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 RTN3O95197 1032 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 IGLV1-44P01699 117 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 LDHCP07864 332 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 IGHV4-38-2P0DP08 117 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 ACTN1P12814 892 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 KRT5P13647 590 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 RGS2P41220 211 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 PIK3CAP42336 1068 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 FKBP1AP62942 108 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 TBCEQ15813 527 aaPredicted RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 MCMDC2Q4G0Z9 681 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 LRIF1Q5T3J3 769 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 NCEH1Q6PIU2 408 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 CWC27Q6UX04 472 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 CCDC190Q86UF4 302 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 TMTC2Q8N394 836 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 C1orf52Q8N6N3 182 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF485Q8NCK3 441 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 WDR20Q8TBZ3 569 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF473Q8WTR7 871 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 ARHGEF2Q92974 986 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 PERPQ96FX8 193 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 SMC6Q96SB8 1091 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 EGLN1Q9GZT9 426 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 POLR1BQ9H9Y6 1135 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 PIH1D3Q9NQM4 214 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 TRMT1Q9NXH9 659 aaKnown RBP5.08□□□□□ -1.6
CCDC39-202ENST00000471307 OGFRQ9NZT2 677 aa5.08□□□□□ -1.6
CCDC39-202ENST00000471307 MYH13Q9UKX3 1938 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 FER1L6Q2WGJ9 1857 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ARFGEF1Q9Y6D6 1849 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 A0A1B0GU03 582 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 PSMD14O00487 310 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 CLIC2O15247 247 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ECE2O60344 883 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 TMCC2O75069 709 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 NR3C1P04150 777 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 EIF2S1P05198 315 aaKnown RBP5.07□□□□□ -1.6
CCDC39-202ENST00000471307 GNB3P16520 340 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ACADLP28330 430 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 GSTO1P78417 241 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 PCGF3Q3KNV8 242 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ZC2HC1BQ5TFG8 222 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 C15orf39Q6ZRI6 1047 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 TPRG1Q6ZUI0 275 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ANO5Q75V66 913 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 NOTCH2NLQ7Z3S9 236 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 KRTAP7-1Q8IUC3 87 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 OR8K5Q8NH50 307 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 HCAR2Q8TDS4 363 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 NSUN4Q96CB9 384 aaKnown RBP5.07□□□□□ -1.6
CCDC39-202ENST00000471307 PPM1MQ96MI6 270 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 RAI14Q9P0K7 980 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 RCC2Q9P258 522 aaKnown RBP5.07□□□□□ -1.6
CCDC39-202ENST00000471307 MTMR6Q9Y217 621 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 KCNK7Q9Y2U2 307 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 DUOX1Q9NRD9 1551 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 MYH7P12883 1935 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 CCDC88AQ3V6T2 1871 aa5.07□□□□□ -1.6
CCDC39-202ENST00000471307 MYO5AQ9Y4I1 1855 aaKnown RBP5.07□□□□□ -1.6
CCDC39-202ENST00000471307 ZNF532Q9HCE3 1301 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 A0A0D9SFI3 127 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 FAM237BA0A1B0GVD1 139 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 KCNK5O95279 499 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 BMP10O95393 424 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 AGR2O95994 175 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 TSHBP01222 138 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 LIPFP07098 398 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 TMEM11P17152 192 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 MSH3P20585 1137 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 HOXA13P31271 388 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 RPS3AP61247 264 aaKnown RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 MECOMQ03112 1051 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 TNIP1Q15025 636 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 TSTQ16762 297 aaKnown RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 HYIQ5T013 277 aa5.06□□□□□ -1.6
CCDC39-202ENST00000471307 FAM109BQ6ICB4 259 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 NAA16Q6N069 864 aaPredicted RBP5.06□□□□□ -1.6
CCDC39-202ENST00000471307 FAM53AQ6NSI3 398 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms