RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 ARL10Q8N8L6 244 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 PTGR2Q8N8N7 351 aaPredicted RBP11.29□□□□□ -0.6
FN1-217ENST00000471193 OR52E1Q8NGJ3 308 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 OR9A1PQ8NGU1 263 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 OR4C6Q8NH72 309 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 RHBDF1Q96CC6 855 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 CCDC126Q96EE4 140 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 CCDC138Q96M89 665 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 CAMK1GQ96NX5 476 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 EGFL8Q99944 293 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 TMEM79Q9BSE2 394 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 MECRQ9BV79 373 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 DUSP23Q9BVJ7 150 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 RAB11FIP5Q9BXF6 653 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 SLC40A1Q9NP59 571 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 OXSMQ9NWU1 459 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 NCKIPSDQ9NZQ3 722 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 SIRPGQ9P1W8 387 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 STOX2Q9P2F5 926 aaPredicted RBP11.29□□□□□ -0.6
FN1-217ENST00000471193 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 CIDEBQ9UHD4 219 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 PLAGL1Q9UM63 463 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 TDRKHQ9Y2W6 561 aaKnown RBP11.29□□□□□ -0.6
FN1-217ENST00000471193 HCN4Q9Y3Q4 1203 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 ADAMTS9Q9P2N4 1935 aa11.29□□□□□ -0.6
FN1-217ENST00000471193 VPS13AQ96RL7 3174 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 TAPBPO15533 448 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 KDM1AO60341 852 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 IPO13O94829 963 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 SLC16A8O95907 504 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 VIPP01282 170 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 RPS17P08708 135 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 PKLRP30613 574 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 SLC6A12P48065 614 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 HNMTP50135 292 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PRKAA2P54646 552 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 DNAJB13P59910 316 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 HHEXQ03014 270 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 SPEM2Q0P670 501 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PRKG2Q13237 762 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 GPR18Q14330 331 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 KRT33BQ14525 404 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 CSRP2Q16527 193 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PFKFB4Q16877 469 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 LIPMQ5VYY2 423 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 ZCCHC8Q6NZY4 707 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 KLHDC8AQ8IYD2 350 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 ARL14Q8N4G2 192 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 ZNF480Q8WV37 535 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 ZFPM2Q8WW38 1151 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 ATL1Q8WXF7 558 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 L3HYPDHQ96EM0 354 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 TMEM237Q96Q45 408 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 EDEM2Q9BV94 578 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 STN1Q9H668 368 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 PARD6AQ9NPB6 346 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 SEMA4GQ9NTN9 838 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 INTS9Q9NV88 658 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 WWOXQ9NZC7 414 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PTBP2Q9UKA9 531 aaKnown RBP11.28□□□□□ -0.6
FN1-217ENST00000471193 ICKQ9UPZ9 632 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 GPR179Q6PRD1 2367 aa11.28□□□□□ -0.6
FN1-217ENST00000471193 MUC6Q6W4X9 2439 aa11.27□□□□□ -0.6
FN1-217ENST00000471193 SDK1Q7Z5N4 2213 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 TRIM38O00635 465 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 TRIM13O60858 407 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 FGF3P11487 239 aaPredicted RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 SHMT2P34897 504 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 GGT5P36269 586 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 HSD17B2P37059 387 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 AGTR2P50052 363 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 RAB28P51157 221 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 PNLIPRP1P54315 467 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 HERVK_113P63132 956 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 ARHGAP19Q14CB8 494 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 PCBP2Q15366 365 aaKnown RBP eCLIP11.27□□□□□ -0.61
FN1-217ENST00000471193 CYP2A13Q16696 494 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 ZXDCQ2QGD7 858 aaPredicted RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 C18orf21Q32NC0 220 aaPredicted RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 ZNF678Q5SXM1 525 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 AGTRAPQ6RW13 159 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 RAB44Q7Z6P3 723 aaPredicted RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 LRRC56Q8IYG6 542 aaPredicted RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 RAB42Q8N4Z0 105 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 FAM181AQ8N9Y4 354 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 OR2L8Q8NGY9 312 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 HMGCLL1Q8TB92 370 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 PHF21BQ96EK2 531 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 IL17FQ96PD4 163 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 PAIP2Q9BPZ3 127 aaKnown RBP11.27□□□□□ -0.61
FN1-217ENST00000471193 C1QTNF3Q9BXJ4 246 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 ERVK-6Q9BXR3 956 aa11.27□□□□□ -0.61
FN1-217ENST00000471193 UCK1Q9HA47 277 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms