RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 SELENOMQ8WWX9 145 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 HIC2Q96JB3 615 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 TSSK3Q96PN8 268 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 PHF12Q96QT6 1004 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 YME1L1Q96TA2 773 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 LTB4R2Q9NPC1 389 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 HPS4Q9NQG7 708 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 LIMD1Q9UGP4 676 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 ADGRE2Q9UHX3 823 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 PPIL1Q9Y3C6 166 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 PCDHB14Q9Y5E9 798 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 PCDHGA11Q9Y5H2 935 aa14.33□□□□□ -0.12
CBWD3-205ENST00000469687 KCNE1BA0A087WTH5 132 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TRMUO75648 421 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 FGF18O76093 207 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 IL6P05231 212 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 C7P10643 843 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 ITPKAP23677 461 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 MTHFRP42898 656 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 ARSFP54793 590 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PRMT2P55345 433 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PPP1R8Q12972 351 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 MAD2L1Q13257 205 aaPredicted RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PTCHD3Q3KNS1 767 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CARD16Q5EG05 197 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 RNF165Q6ZSG1 346 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 USP51Q70EK9 711 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PATL1Q86TB9 770 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 METTL3Q86U44 580 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CHCHD4Q8N4Q1 142 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 EGLN2Q96KS0 407 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TOX2Q96NM4 488 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CCDC115Q96NT0 180 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 P2RY13Q9BPV8 354 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 INPP5KQ9BT40 448 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TRIM64A6NGJ6 449 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TRIM64CA6NLI5 447 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 GSTA4O15217 222 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TULP3O75386 442 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PRSS23O95084 383 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 LRATO95237 230 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 OR56A5P0C7T3 313 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CBSLP0DN79 551 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CBSP35520 551 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CDKN2CP42773 168 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 RPS14P62263 151 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CHRNB3Q05901 458 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 RUNDC3AQ59EK9 446 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 AP1ARQ63HQ0 302 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 LILRA6Q6PI73 481 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 ABRAXAS1Q6UWZ7 409 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 TNIP2Q8NFZ5 429 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 GFM2Q969S9 779 aaKnown RBP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 APIPQ96GX9 242 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 SLC12A9Q9BXP2 914 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 ATG10Q9H0Y0 220 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 GORASP2Q9H8Y8 452 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 PARVBQ9HBI1 364 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 CD320Q9NPF0 282 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 SERHLQ9NQF3 203 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.32□□□□□ -0.12
CBWD3-205ENST00000469687 EBF1Q9UH73 591 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
CBWD3-205ENST00000469687 NOTCH4Q99466 2003 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 A0A087WXM4 84 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 TRBV5-3A0A0A0MS03 114 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 B4GAT1O43505 415 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 KRT6AP02538 564 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 KRT6BP04259 564 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 CTSAP10619 480 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 KRT6CP48668 564 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 CDK9P50750 372 aaKnown RBP14.31□□□□□ -0.12
CBWD3-205ENST00000469687 GBX1Q14549 363 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 STK32CQ86UX6 486 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 GLB1L3Q8NCI6 653 aaPredicted RBP14.31□□□□□ -0.12
CBWD3-205ENST00000469687 OR10Q1Q8NGQ4 319 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 ASB11Q8WXH4 323 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 SORCS1Q8WY21 1168 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 FOXJ1Q92949 421 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 CPEB1Q9BZB8 566 aaKnown RBP14.31□□□□□ -0.12
CBWD3-205ENST00000469687 SLC29A3Q9BZD2 475 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 PAIP1Q9H074 479 aaKnown RBP14.31□□□□□ -0.12
CBWD3-205ENST00000469687 LINC00597Q9H2U6 94 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 C8orf4Q9NR00 106 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 ASIC5Q9NY37 505 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 PPT2Q9UMR5 302 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 INVSQ9Y283 1065 aa14.31□□□□□ -0.12
CBWD3-205ENST00000469687 ELOVL7A1L3X0 281 aa14.3□□□□□ -0.12
CBWD3-205ENST00000469687 TMEM202A6NGA9 273 aa14.3□□□□□ -0.12
CBWD3-205ENST00000469687 TMX2-CTNND1H3BSU7 103 aa14.3□□□□□ -0.12
CBWD3-205ENST00000469687 CXCR6O00574 342 aa14.3□□□□□ -0.12
CBWD3-205ENST00000469687 DEAF1O75398 565 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-205ENST00000469687 PRKD3O94806 890 aa14.3□□□□□ -0.12
CBWD3-205ENST00000469687 POP4O95707 220 aaKnown RBP14.3□□□□□ -0.12
CBWD3-205ENST00000469687 ALPLP05186 524 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms