RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 UNC5DQ6UXZ4 953 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 CDHR3Q6ZTQ4 885 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 BPHLQ86WA6 291 aaPredicted RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 CARFQ8N187 725 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF843Q8N446 348 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 LINC01555Q8NAE3 123 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 SLC38A9Q8NBW4 561 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 FLVCR1-AS1Q8TAF5 88 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 CT55Q8WUE5 264 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 STARD8Q92502 1023 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 CLIP3Q96DZ5 547 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 WBP1Q96G27 269 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 FCRL4Q96PJ5 515 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 TRIM51Q9BSJ1 452 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 EFHD1Q9BUP0 239 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 LHX9Q9NQ69 397 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 IARS2Q9NSE4 1012 aaKnown RBP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 OR6C2Q9NZP2 312 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PCYOX1Q9UHG3 505 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 SLC39A10Q9ULF5 831 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ZFYVE26Q68DK2 2539 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 ITPR1Q14643 2758 aa11.16□□□□□ -0.62
CDHR3-205ENST00000468143 PTPRQQ9UMZ3 2332 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 E5RI56 91 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 TTI1O43156 1089 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 HCRTR1O43613 425 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 KDM1AO60341 852 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 USP1O94782 785 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 HAUS5O94927 633 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 C1orf105O95561 183 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 ESR1P03372 595 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 MT-ND3P03897 115 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 RPN2P04844 631 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 ITGB2P05107 769 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 CTSBP07858 339 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 CD9P21926 228 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 IVDP26440 423 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 OAS2P29728 719 aaKnown RBP11.15□□□□□ -0.62
CDHR3-205ENST00000468143 PKLRP30613 574 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SLC1A2P43004 574 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 PAFAH1B1P43034 410 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 RAB28P51157 221 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 MPP1Q00013 466 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 DR1Q01658 176 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 C19orf57Q0VDD7 668 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 GPS2Q13227 327 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 DEFB110Q30KQ9 67 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 DEFB109BQ30KR1 87 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 BBS9Q3SYG4 887 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 HSP90AA5PQ58FG0 334 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 ACSBG2Q5FVE4 666 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 LCN10Q6JVE6 187 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 ZNF549Q6P9A3 640 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 TTC23LQ6PF05 361 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 PCGF5Q86SE9 256 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 IGDCC3Q8IVU1 814 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 DCUN1D3Q8IWE4 304 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 ZBTB2Q8N680 514 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 C19orf47Q8N9M1 422 aaKnown RBP11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SLCO2A1Q92959 643 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 MR1Q95460 341 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SLC30A3Q99726 388 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 MENTQ9BUN1 341 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 TRIM31Q9BZY9 425 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SPRTNQ9H040 489 aaPredicted RBP11.15□□□□□ -0.62
CDHR3-205ENST00000468143 FANCEQ9HB96 536 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 INTS10Q9NVR2 710 aaKnown RBP11.15□□□□□ -0.62
CDHR3-205ENST00000468143 SERTAD3Q9UJW9 196 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 FAM169AQ9Y6X4 670 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 BPTFQ12830 3046 aa11.15□□□□□ -0.62
CDHR3-205ENST00000468143 FAM208BQ5VWN6 2430 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 A0A0J9YY10 115 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 H3BMM5 538 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 TERTO14746 1132 aaKnown RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 RASGRF2O14827 1237 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CPNE3O75131 537 aaKnown RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 FURINP09958 794 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 ERVK-10P10266 1014 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 PGAM1P18669 254 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CYP2A7P20853 494 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 ADARP55265 1226 aaKnown RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 RPS18P62269 152 aaKnown RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CDC20Q12834 499 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 DNASE1L3Q13609 305 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 CUL1Q13616 776 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 KIR2DS3Q14952 304 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 KLHL38Q2WGJ6 581 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 ARMC3Q5W041 872 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 BORAQ6PGQ7 559 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 KCNMB4Q86W47 210 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 OR2L8Q8NGY9 312 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 OR8K5Q8NH50 307 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 N4BP2L2Q92802 583 aaPredicted RBP11.14□□□□□ -0.63
CDHR3-205ENST00000468143 RAD51AP1Q96B01 352 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 MED8Q96G25 268 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 TCTN2Q96GX1 697 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 FOPNLQ96NB1 174 aa11.14□□□□□ -0.63
CDHR3-205ENST00000468143 KRT12Q99456 494 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms