RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ATP6V1E2Q96A05 226 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 OTUB1Q96FW1 271 aaPredicted RBP4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 FAM129AQ9BZQ8 928 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 COQ3Q9NZJ6 369 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 POLLQ9UGP5 575 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 ZDHHC2Q9UIJ5 367 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 POMT1Q9Y6A1 747 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 TAF1P21675 1872 aa4.72□□□□□ -1.65
GAPVD1-211ENST00000467707 BUB3O43684 328 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ATP1A1P05023 1023 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 CSN3P07498 182 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 PLA2G4BP0C869 781 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 PDGFRAP16234 1089 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ADRA2CP18825 462 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 CD22P20273 847 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ACAT1P24752 427 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 MPZP25189 248 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 MZT1Q08AG7 82 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 TAF13Q15543 124 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ENPP7Q6UWV6 458 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 NUP54Q7Z3B4 507 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 SPATA19Q7Z5L4 167 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 C9orf106Q8NAJ2 232 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 OR13A1Q8NGR1 328 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 OR13J1Q8NGT2 312 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 GOT1L1Q8NHS2 421 aaPredicted RBP4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 HES6Q96HZ4 224 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ST6GAL2Q96JF0 529 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 INPP5KQ9BT40 448 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 UPF2Q9HAU5 1272 aaKnown RBP4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 Q9N2K0 584 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 ECHDC1Q9NTX5 307 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 MTUS1Q9ULD2 1270 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 JRKLQ9Y4A0 524 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 PCDH11YQ9BZA8 1340 aa4.71□□□□□ -1.66
GAPVD1-211ENST00000467707 OR6C76A6NM76 312 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 IFIT3O14879 490 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 AP5Z1O43299 807 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 LUC7L3O95232 432 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 PIGNO95427 931 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 GBAP04062 536 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 VIMP08670 466 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 F7P08709 466 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 HAPLN1P10915 354 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 CYP11B2P19099 503 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 PTGER4P35408 488 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 HSD17B3P37058 310 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 MNDAP41218 407 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 TUBB2AQ13885 445 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 NPTX1Q15818 432 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 ODF4Q2M2E3 257 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 TCTE1Q5JU00 501 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 SHEQ5VZ18 495 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 FAM91A1Q658Y4 838 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 KIAA1161Q6NSJ0 714 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 CORO6Q6QEF8 472 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 GDPD4Q6W3E5 623 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 C9orf139Q6ZV77 190 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 PHLDB2Q86SQ0 1253 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 C4orf19Q8IY42 314 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 FGFBP3Q8TAT2 258 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 SPATA20Q8TB22 786 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 SLC47A1Q96FL8 570 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 VMP1Q96GC9 406 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 PKP4Q99569 1192 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 MLPHQ9BV36 600 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 TUBB2BQ9BVA1 445 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 TFB2MQ9H5Q4 396 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 ZNF556Q9HAH1 456 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 MRGBPQ9NV56 204 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 TXNDC16Q9P2K2 825 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 CACNA1IQ9P0X4 2223 aa4.7□□□□□ -1.66
GAPVD1-211ENST00000467707 FAM172BPA6NC97 362 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ENO4A6NNW6 628 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 PRKRAO75569 313 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 SLU7O95391 586 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 MOCS3O95396 460 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 HSPA8P11142 646 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 IRF2P14316 349 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 PAX1P15863 534 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 MSH3P20585 1137 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 TKTP29401 623 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ATP5DP30049 168 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 COPB2P35606 906 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 KLC1Q07866 573 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ZRSR1Q15695 479 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 CA9Q16790 459 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 CDO1Q16878 200 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ZNF672Q499Z4 452 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 MCMDC2Q4G0Z9 681 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 ARHGAP22Q7Z5H3 698 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 NDUFAF2Q8N183 169 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 THAP8Q8NA92 274 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 OR1J1Q8NGS3 322 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 HSD17B8Q92506 261 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 CCDC114Q96M63 670 aa4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-211ENST00000467707 RAD9AQ99638 391 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms