RNA–Protein interactions for RNA: ENST00000466832.5

TRA2B-209, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-209ENST00000466832 ISG20Q96AZ6 181 aaKnown RBP5.67□□□□□ -1.5
TRA2B-209ENST00000466832 IGSF21Q96ID5 467 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 CCDC140Q96MF4 163 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 PGLYRP2Q96PD5 576 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 TMPRSS13Q9BYE2 586 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 SLC2A11Q9BYW1 496 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 TUBA8Q9NY65 449 aaPredicted RBP5.67□□□□□ -1.5
TRA2B-209ENST00000466832 DLGAP2Q9P1A6 1054 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 GNPTGQ9UJJ9 305 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 APPL1Q9UKG1 709 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 RNF112Q9ULX5 631 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 DHRS7Q9Y394 339 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 PPIL1Q9Y3C6 166 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 PCDHGA2Q9Y5H1 932 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 OR51B4Q9Y5P0 310 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 PLXNB3Q9ULL4 1909 aa5.67□□□□□ -1.5
TRA2B-209ENST00000466832 PLXNA2O75051 1894 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 A0A1W2PP18 115 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 FAM234BA2RU67 622 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TBKBP1A7MCY6 615 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ANKRD66B4E2M5 251 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 HTRA2O43464 458 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SUPT7LO94864 414 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 GJB5O95377 273 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 JUNP05412 331 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ENO2P09104 434 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ENO3P13929 434 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DDX6P26196 483 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 CORO1AP31146 461 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 HMGCLP35914 325 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TUBA4AP68366 448 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SLC7A9P82251 487 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DUSP4Q13115 394 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DYNC1I2Q13409 638 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SEMA3AQ14563 771 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PDK3Q15120 406 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 AGKQ53H12 422 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SETMARQ53H47 684 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TCHHL1Q5QJ38 904 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PPM1LQ5SGD2 360 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SDHAF4Q5VUM1 108 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 RETSATQ6NUM9 610 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 MACC1Q6ZN28 852 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 MSANTD1Q6ZTZ1 278 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DDX53Q86TM3 631 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PROSER1Q86XN7 944 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TTC9BQ8N6N2 239 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 LEMD2Q8NC56 503 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DBF4BQ8NFT6 615 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TNIP2Q8NFZ5 429 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 OR2T34Q8NGX1 318 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 OR2T3Q8NH03 318 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 UBASH3BQ8TF42 649 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 USP7Q93009 1102 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 FUBP1Q96AE4 644 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ULK4Q96C45 1275 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SCLYQ96I15 445 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 BIRC8Q96P09 236 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SMAD5Q99717 465 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SLC29A3Q9BZD2 475 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 FOXQ1Q9C009 403 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 EBF3Q9H4W6 596 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 AKTIPQ9H8T0 292 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SLC52A3Q9NQ40 469 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 CCM2LQ9NUG4 571 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ACTR3BQ9P1U1 418 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 NFKBIL1Q9UBC1 381 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 CGGBP1Q9UFW8 167 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 LEF1Q9UJU2 399 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PTBP2Q9UKA9 531 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PCTPQ9UKL6 214 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 MED16Q9Y2X0 877 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PKP3Q9Y446 797 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SPEF1Q9Y4P9 236 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 YIPF1Q9Y548 306 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 AP4S1Q9Y587 144 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DNAJC15Q9Y5T4 150 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 GPR45Q9Y5Y3 372 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ARL5AQ9Y689 179 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 COMMD3-BMI1R4GMX3 469 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SCN5AQ14524 2016 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 MEGF11A6BM72 1044 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 AGAP14A8MT82 685 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ANGPT2O15123 496 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 SLC16A5O15375 505 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 STX7O15400 261 aaKnown RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ECI2O75521 394 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TMCC1O94876 653 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PGLSO95336 258 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 TSPAN12O95859 305 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PDHA1P08559 390 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 GFAPP14136 432 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 HNRNPLP14866 589 aaKnown RBP eCLIP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 ZNF7P17097 686 aaPredicted RBP5.66□□□□□ -1.5
TRA2B-209ENST00000466832 BPIP17213 487 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PRPH2P23942 346 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 PPM1AP35813 382 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 GMPRP36959 345 aa5.66□□□□□ -1.5
TRA2B-209ENST00000466832 DPP6P42658 865 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms