RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 KMT5CQ86Y97 462 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 CEP97Q8IW35 865 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 GSPT2Q8IYD1 628 aaKnown RBP16.43■□□□□ 0.22
USP39-211ENST00000465282 ADGRF3Q8IZF5 1079 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 OR9A1PQ8NGU1 263 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 OR2L8Q8NGY9 312 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 WDR36Q8NI36 951 aaKnown RBP16.43■□□□□ 0.22
USP39-211ENST00000465282 MCOLN3Q8TDD5 553 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 CCDC74BQ96LY2 380 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 PAFAH2Q99487 392 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 MENTQ9BUN1 341 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 SLC12A9Q9BXP2 914 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 TRIM54Q9BYV2 358 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 PARVBQ9HBI1 364 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 RAB21Q9UL25 225 aa16.43■□□□□ 0.22
USP39-211ENST00000465282 NCOR2Q9Y618 2525 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 PIPSLA2A3N6 862 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 TLCD2A6NGC4 264 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 FKBP9O95302 570 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 WISP3O95389 354 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 ENO2P09104 434 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 TPBGLP0DKB5 382 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 POLR2CP19387 275 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 CSTF2P33240 577 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP39-211ENST00000465282 CLDN6P56747 220 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 RTP5Q14D33 572 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 UAP1Q16222 522 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 RAB11FIP2Q7L804 512 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 LSMEM2Q8N112 164 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 AGBL5Q8NDL9 886 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 JPH3Q8WXH2 748 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 TGM7Q96PF1 710 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 PARD6BQ9BYG5 372 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 DERL2Q9GZP9 239 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 C1GALT1Q9NS00 363 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.42■□□□□ 0.22
USP39-211ENST00000465282 POMT2Q9UKY4 750 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 NOVA2Q9UNW9 492 aaKnown RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 RUVBL2Q9Y230 463 aaKnown RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 PCDHGA8Q9Y5G5 932 aa16.42■□□□□ 0.22
USP39-211ENST00000465282 V9GYY5 206 aaPredicted RBP16.42■□□□□ 0.22
USP39-211ENST00000465282 CCDC189A1A4V9 331 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 PABPN1LA6NDY0 278 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 POC1B-GALNT4F8VUJ3 575 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 BTN3A3O00478 584 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 BTN3A1O00481 513 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 CHRM5P08912 532 aaPredicted RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 HIST1H2AGP0C0S8 130 aaPredicted RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 ERGP11308 486 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 HIST1H2ADP20671 130 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 PRDX3P30048 256 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 BDKRB1P46663 353 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 LSSP48449 732 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 GFERP55789 205 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 AP1S2P56377 157 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 CYP2A13Q16696 494 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 MROH9Q5TGP6 573 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 CACHD1Q5VU97 1274 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 IGF2-ASQ6U949 168 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 TMEM207Q6UWW9 146 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 AENQ8WTP8 325 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 UBLCP1Q8WVY7 318 aaPredicted RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 KLHL6Q8WZ60 621 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 NXPE2Q96DL1 559 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 MRRFQ96E11 262 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 HIST1H2AHQ96KK5 128 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 UBXN10Q96LJ8 280 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 CCDC138Q96M89 665 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 HIST1H2AJQ99878 128 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 H2AFJQ9BTM1 129 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 DHRS4Q9BTZ2 278 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 EPB41L4BQ9H329 900 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 ZNF768Q9H5H4 540 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 XKR8Q9H6D3 395 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 CAB39LQ9H9S4 337 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 POLR1BQ9H9Y6 1135 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 ACTR10Q9NZ32 417 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 TMEM9Q9P0T7 183 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 TSR3Q9UJK0 312 aaKnown RBP16.41■□□□□ 0.22
USP39-211ENST00000465282 CEP295Q9C0D2 2601 aa16.41■□□□□ 0.22
USP39-211ENST00000465282 GSAPA4D1B5 854 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 RASSF9O75901 435 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 KRT37O76014 449 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 SERPINB8P50452 374 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 ATP6V0D1P61421 351 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 SNAP47Q5SQN1 464 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 CYB5D1Q6P9G0 228 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 ADGRD1Q6QNK2 874 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 RAPH1Q70E73 1250 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 ADAMTSL2Q86TH1 951 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 FBXO39Q8N4B4 442 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 UHMK1Q8TAS1 419 aaKnown RBP16.4■□□□□ 0.22
USP39-211ENST00000465282 DCAKDQ8WVC6 231 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 ISL2Q96A47 359 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 MTBPQ96DY7 904 aa16.4■□□□□ 0.22
USP39-211ENST00000465282 PITPNM3Q9BZ71 974 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms