RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 OR2I1PQ8NGU4 316 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 CCDC126Q96EE4 140 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 UNKQ9C0B0 810 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 CPSF2Q9P2I0 782 aaKnown RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 XPR1Q9UBH6 696 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 MARCOQ9UEW3 520 aaPredicted RBP16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 GMEB2Q9UKD1 530 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 PCOLCE2Q9UKZ9 415 aa16.51■□□□□ 0.23
EXOSC3-203ENST00000465229 ARHGEF17Q96PE2 2063 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 A6NCN8 305 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 LMO7DNF2Z398 122 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ZNF195O14628 629 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 YY2O15391 372 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 CBX6O95503 412 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 HSPA4LO95757 839 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ZNF806P0C7X5 589 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ENGP17813 658 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ACADLP28330 430 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ABRQ12979 859 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 RCN2Q14257 317 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 CLCA4Q14CN2 919 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ACAP2Q15057 778 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 CAPRIN2Q6IMN6 1127 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ABRAXAS1Q6UWZ7 409 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 WASH2PQ6VEQ5 465 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 NEK10Q6ZWH5 1172 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 DERL2Q9GZP9 239 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 NMUR2Q9GZQ4 415 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 ILKAPQ9H0C8 392 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 WASH6PQ9NQA3 447 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 SCHIP1Q9P0W5 487 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 IKZF3Q9UKT9 509 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 APOBEC2Q9Y235 224 aaKnown RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 RAP2CQ9Y3L5 183 aa16.5■□□□□ 0.23
EXOSC3-203ENST00000465229 PDZK1P1A8MUH7 402 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 CAPN14A8MX76 684 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 NPHS1O60500 1241 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 MATN4O95460 622 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 MPC1LP0DKB6 136 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 CD1DP15813 335 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 ATP5F1P24539 256 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 TUBB3Q13509 450 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 UAP1L1Q3KQV9 507 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 TECRLQ5HYJ1 363 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 ATG14Q6ZNE5 492 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 PDZD3Q86UT5 571 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 ALYREFQ86V81 257 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 GKN2Q86XP6 184 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 PARP9Q8IXQ6 854 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 SDR16C5Q8N3Y7 309 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 FAM46DQ8NEK8 389 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 SKA2Q8WVK7 121 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 GTPBP2Q9BX10 602 aaKnown RBP16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 ARL8BQ9NVJ2 186 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 TRIM33Q9UPN9 1127 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 CSNK1G3Q9Y6M4 447 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 PCDH15Q96QU1 1955 aa16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 ARID1BQ8NFD5 2236 aaPredicted RBP16.49■□□□□ 0.23
EXOSC3-203ENST00000465229 LNP1A1A4G5 178 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SLCO1B7G3V0H7 640 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 ZBTB14O43829 449 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 DLX3O60479 287 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 CER1O95813 267 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 KRT16P08779 473 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SLC35G4P0C7Q5 338 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 EPHA8P29322 1005 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 HNRNPH1P31943 449 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 GLRBP48167 497 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 PRKAA1Q13131 559 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 KANSL1Q7Z3B3 1105 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 MYO1HQ8N1T3 1032 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 KIF2BQ8N4N8 673 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SAP25Q8TEE9 199 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 ASB11Q8WXH4 323 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 RILPQ96NA2 401 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 INSM2Q96T92 566 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 GOLGA4Q13439 2230 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 CDC7O00311 574 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 GIMD1P0DJR0 217 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 F3P13726 295 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 IDH3AP50213 366 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 ATP6V0D1P61421 351 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SPEM2Q0P670 501 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SF3A2Q15428 464 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 IYDQ6PHW0 289 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 MAVSQ7Z434 540 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 ISCA2Q86U28 154 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 RASGRP3Q8IV61 690 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 SFTPA2Q8IWL1 248 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 CFAP61Q8NHU2 1237 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 TFGQ92734 400 aaPredicted RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 DLG3Q92796 817 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 PTERQ96BW5 349 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 VTI1BQ9UEU0 232 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 DOLKQ9UPQ8 538 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 HCN4Q9Y3Q4 1203 aa16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 CFAP20Q9Y6A4 193 aaKnown RBP16.48■□□□□ 0.23
EXOSC3-203ENST00000465229 TMEM131Q92545 1883 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms