RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 STMN3Q9NZ72 180 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 KIF17Q9P2E2 1029 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 MAPRE3Q9UPY8 281 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 INVSQ9Y283 1065 aa7.05□□□□□ -1.28
CLSTN1-204ENST00000464286 SBF1O95248 1867 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SMIM28A0A1B0GU29 152 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 NOTOA8MTQ0 251 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM72CH0Y354 149 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 H3BMM5 538 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TMX2-CTNND1H3BSU7 103 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 PSMD11O00231 422 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 WNT9AO14904 365 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SCO2O43819 266 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 MPZL2O60487 215 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 MAFKO60675 156 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 NDUFS3O75489 264 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 RECQL4O94761 1208 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ALX3O95076 343 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 CCNDBP1O95273 360 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 LGALS2P05162 132 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HLA-DQB2P05538 268 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 YES1P07947 543 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HMBSP08397 361 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SERPINF2P08697 491 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HTR1AP08908 422 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 M6PRP20645 277 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FPR1P21462 350 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ACVR2AP27037 513 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SOX18P35713 384 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HNF4AP41235 474 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TTPAP49638 278 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 GMPSP49915 693 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 KPNA1P52294 538 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FCGRTP55899 365 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 MAP3K7CLP57077 242 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 RAB25P57735 213 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 OR2B6P58173 313 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 LILRA4P59901 499 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 IL2P60568 153 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 UFM1P61960 85 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 CHRNEQ04844 493 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ABHD18Q0P651 414 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 OLIG2Q13516 323 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 STARD3Q14849 445 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 EIF4HQ15056 248 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 C6orf136Q5SQH8 315 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 LDLRAP1Q5SW96 308 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 CCNJQ5T5M9 372 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM72AQ5TYM5 149 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 AFMIDQ63HM1 303 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM72DQ6L9T8 149 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TBPL2Q6SJ96 375 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 DLEU7Q6UYE1 221 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 GDPGP1Q6ZNW5 385 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 CHST15Q7LFX5 561 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HDDC2Q7Z4H3 204 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM72BQ86X60 149 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 GPSM1Q86YR5 675 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 RAB43Q86YS6 212 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 UMODL1-AS1Q8N2C9 162 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 STK40Q8N2I9 435 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 Q8N3U1 123 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 RYBPQ8N488 228 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 OR52K2Q8NGK3 314 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SPATA22Q8NHS9 363 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 NDNFQ8TB73 568 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 BRSK1Q8TDC3 778 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ANKRD49Q8WVL7 239 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TRAPPC12Q8WVT3 735 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 EXT2Q93063 718 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 PLD4Q96BZ4 506 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 FAM120BQ96EK7 910 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 MOCOSQ96EN8 888 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 PYURFQ96I23 114 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ITCHQ96J02 903 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 NSUN5Q96P11 429 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SERPINB11Q96P15 392 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 PPP1R16BQ96T49 567 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 HTATIP2Q9BUP3 242 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TRAF4Q9BUZ4 470 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 GON7Q9BXV9 100 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TMEM245Q9H330 911 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TP63Q9H3D4 680 aaPredicted RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SP110Q9HB58 689 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 C3orf14Q9HBI5 128 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ACSS2Q9NR19 701 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ABCC13Q9NSE7 274 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 OLA1Q9NTK5 396 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 DCAF13Q9NV06 445 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 SLC2A6Q9UGQ3 507 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TRMT6Q9UJA5 497 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 CORO2BQ9UQ03 480 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 TRAPPC4Q9Y296 219 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 PCDHGB2Q9Y5G2 931 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 LYVE1Q9Y5Y7 322 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 ZNF638Q14966 1978 aaKnown RBP7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 WDR90Q96KV7 1748 aa7.04□□□□□ -1.28
CLSTN1-204ENST00000464286 A0A075B6Q4 140 aa7.03□□□□□ -1.28
CLSTN1-204ENST00000464286 A0A096LPI6 279 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms