RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 SNRNP200O75643 2136 aaKnown RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 RP1L1Q8IWN7 2480 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 F8W8V4 182 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 ZSCAN9O15535 394 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 STIP1P31948 543 aaKnown RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 FOLR3P41439 243 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 GRIA1P42261 906 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 PRAMEP78395 509 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 DCDP81605 110 aaKnown RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 PLOD1Q02809 727 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 HSPA14Q0VDF9 509 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 SNX1Q13596 522 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 PRR30Q53SZ7 412 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 TSTD2Q5T7W7 516 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 ZNF385CQ66K41 422 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 PRUNE1Q86TP1 453 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 C2orf73Q8N5S3 287 aaPredicted RBP23.21■■□□□ 1.31
TTC3-212ENST00000463216 HES6Q96HZ4 224 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 C17orf62Q9BQA9 187 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 CDYLQ9Y232 598 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 KLHL20Q9Y2M5 609 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 MAP4K5Q9Y4K4 846 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 CAPN6Q9Y6Q1 641 aa23.21■■□□□ 1.31
TTC3-212ENST00000463216 ERI2A8K979 691 aaKnown RBP23.2■■□□□ 1.3
TTC3-212ENST00000463216 SORBS2O94875 1100 aaKnown RBP23.2■■□□□ 1.3
TTC3-212ENST00000463216 FDFT1P37268 417 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 INPP5JQ15735 1006 aaPredicted RBP23.2■■□□□ 1.3
TTC3-212ENST00000463216 FASTKD1Q53R41 847 aaKnown RBP23.2■■□□□ 1.3
TTC3-212ENST00000463216 RHBDD2Q6NTF9 364 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 TAX1BP1Q86VP1 789 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 LMNTD1Q8N9Z9 388 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 OR4L1Q8NH43 312 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 C1orf54Q8WWF1 131 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 ZNF778Q96MU6 729 aa23.2■■□□□ 1.3
TTC3-212ENST00000463216 PCSK5Q92824 1860 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 IQCF5A8MTL0 148 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PEX12O00623 359 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 LIASO43766 372 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 KLF7O75840 302 aaPredicted RBP23.19■■□□□ 1.3
TTC3-212ENST00000463216 ETS1P14921 441 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 ALAS2P22557 587 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 ADRA1DP25100 572 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PSMA3P25788 255 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PEBP1P30086 187 aaKnown RBP23.19■■□□□ 1.3
TTC3-212ENST00000463216 CCR7P32248 378 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 GABRA4P48169 554 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 FOXL2P58012 376 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 SSPNQ14714 243 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 KIR2DS3Q14952 304 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 MRGPREQ86SM8 312 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 TMEM139Q8IV31 216 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 GLIS1Q8NBF1 620 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 SPC24Q8NBT2 197 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 FLVCR1-AS1Q8TAF5 88 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 GBP5Q96PP8 586 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PSMG3-AS1Q96PY0 264 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 NDC1Q9BTX1 674 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 TSSK1BQ9BXA7 367 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 RAB6BQ9NRW1 208 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 ANAPC5Q9UJX4 755 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PLCL2Q9UPR0 1127 aa23.19■■□□□ 1.3
TTC3-212ENST00000463216 PPARGP37231 505 aaPredicted RBP23.18■■□□□ 1.3
TTC3-212ENST00000463216 SEMA3AQ14563 771 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 SLC5A12Q1EHB4 618 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 DNAJC21Q5F1R6 531 aaKnown RBP23.18■■□□□ 1.3
TTC3-212ENST00000463216 SLC6A19Q695T7 634 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 TLDC1Q6P9B6 456 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 LDB1Q86U70 411 aaPredicted RBP23.18■■□□□ 1.3
TTC3-212ENST00000463216 VRK3Q8IV63 474 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 DNAJC22Q8N4W6 341 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 RBMXL3Q8N7X1 1067 aaKnown RBP23.18■■□□□ 1.3
TTC3-212ENST00000463216 CLEC1AQ8NC01 280 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 PROKR1Q8TCW9 393 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 LKAAEAR1Q8TD35 194 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 FER1L6-AS2Q96M78 137 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 AP1M1Q9BXS5 423 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.18■■□□□ 1.3
TTC3-212ENST00000463216 SRPK3Q9UPE1 567 aa23.18■■□□□ 1.3
TTC3-212ENST00000463216 SHANK1Q9Y566 2161 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 ESPL1Q14674 2120 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 H3BMH7 237 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 SUN1O94901 812 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 APRTP07741 180 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 MAGP20916 626 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 PKLRP30613 574 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 RAB28P51157 221 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 OASLQ15646 514 aaKnown RBP23.17■■□□□ 1.3
TTC3-212ENST00000463216 ZNF534Q76KX8 674 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 KRT222Q8N1A0 295 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 CCDC89Q8N998 374 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 Q8NA96 180 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 PPHLN1Q8NEY8 458 aaKnown RBP23.17■■□□□ 1.3
TTC3-212ENST00000463216 IP6K3Q96PC2 410 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 IL17FQ96PD4 163 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 RANBP9Q96S59 729 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 SMAD5Q99717 465 aaKnown RBP23.17■■□□□ 1.3
TTC3-212ENST00000463216 TCAF1Q9Y4C2 921 aa23.17■■□□□ 1.3
TTC3-212ENST00000463216 MASP2O00187 686 aa23.16■■□□□ 1.3
TTC3-212ENST00000463216 APOA4P06727 396 aa23.16■■□□□ 1.3
TTC3-212ENST00000463216 NKAIN1Q4KMZ8 207 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms