RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 TRPC3Q13507 836 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 SEC23BQ15437 767 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 TMEM119Q4V9L6 283 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 AWAT1Q58HT5 328 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 INTS11Q5TA45 600 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 SFMBT2Q5VUG0 894 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 INO80CQ6PI98 192 aaPredicted RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 KIAA1324Q6UXG2 1013 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 ZNF782Q6ZMW2 699 aaPredicted RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 DEF8Q6ZN54 512 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 C4orf50Q6ZRC1 276 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 GALNT7Q86SF2 657 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 SPATA2LQ8IUW3 424 aaPredicted RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 BRSK2Q8IWQ3 736 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 SCN4BQ8IWT1 228 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ZNF248Q8NDW4 579 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ENGASEQ8NFI3 743 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 DPF1Q92782 380 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 GTF3C6Q969F1 213 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PCED1BQ96HM7 432 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PIWIL1Q96J94 861 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 MAELQ96JY0 434 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 C5orf34Q96MH7 638 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ZNF578Q96N58 590 aaPredicted RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 SYT15Q9BQS2 421 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 MSTO1Q9BUK6 570 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 TM2D2Q9BX73 214 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STRA6Q9BX79 667 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ST6GALNAC4Q9H4F1 302 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 ASCL3Q9NQ33 180 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STARD5Q9NSY2 213 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 PDRG1Q9NUG6 133 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 DNAJC17Q9NVM6 304 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 LARSQ9P2J5 1176 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 C11orf21Q9P2W6 132 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 IPO11Q9UI26 975 aaKnown RBP4.89□□□□□ -1.63
COPS3-204ENST00000462236 ODF2LQ9ULJ1 636 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 TMEM98Q9Y2Y6 226 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 STON1Q9Y6Q2 735 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
COPS3-204ENST00000462236 HIVEP1P15822 2718 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 A0A1W2PR77 199 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 VILLO15195 856 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 JAK2O60674 1132 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 HUS1O60921 280 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 LDOC1O95751 146 aaPredicted RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 PENKP01210 267 aaPredicted RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 LCKP06239 509 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 IGHV4-34P06331 123 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 CSF1P09603 554 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 GP1BBP13224 206 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 PKMP14618 531 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 WARSP23381 471 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 ACP1P24666 158 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 CD27P26842 260 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 PRPHP41219 470 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MATR3P43243 847 aaKnown RBP eCLIP4.88□□□□□ -1.63
COPS3-204ENST00000462236 RXRGP48443 463 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 PGFP49763 221 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 CCR5P51681 352 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MVDP53602 400 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MFAP3P55082 362 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 ERVPABLB-1P60509 514 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 B4GALNT1Q00973 533 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MTA1Q13330 715 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 SEMA3AQ14563 771 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MAPRE1Q15691 268 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 ME3Q16798 604 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 LINC00303Q3SY05 128 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 RUNDC3AQ59EK9 446 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 LIPMQ5VYY2 423 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 TMEM215Q68D42 235 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 AADACL2Q6P093 401 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 LVRNQ6Q4G3 990 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 MDGA2Q7Z553 956 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 TMEM200AQ86VY9 491 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 DHX40Q8IX18 779 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 SCFD1Q8WVM8 642 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 BIRC7Q96CA5 298 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 ERLEC1Q96DZ1 483 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 SIPA1Q96FS4 1042 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 BICD1Q96G01 975 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 CNDP2Q96KP4 475 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 SLITRK1Q96PX8 696 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 XPO6Q96QU8 1125 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 ZNF347Q96SE7 839 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 FOXP1Q9H334 677 aaPredicted RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 EBF2Q9HAK2 575 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 THAP1Q9NVV9 213 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 EHD2Q9NZN4 543 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 WDR35Q9P2L0 1181 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 AGO2Q9UKV8 859 aaKnown RBP4.88□□□□□ -1.63
COPS3-204ENST00000462236 ITGA11Q9UKX5 1188 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 APCP25054 2843 aa4.88□□□□□ -1.63
COPS3-204ENST00000462236 CELSR1Q9NYQ6 3014 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 A0A1W2PNU3 283 aaPredicted RBP4.87□□□□□ -1.63
COPS3-204ENST00000462236 NPIPB13A6NJU9 1138 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 NPIPB5A8MRT5 1133 aa4.87□□□□□ -1.63
COPS3-204ENST00000462236 NPIPB4C9JG80 1138 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms