RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 TSPAN17Q96FV3 270 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 C9orf72Q96LT7 481 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 WDR92Q96MX6 357 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 SLC6A18Q96N87 628 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 COPS8Q99627 209 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 FAM167BQ9BTA0 163 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 TMEM109Q9BVC6 243 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 SPATA16Q9BXB7 569 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CDC42EP4Q9H3Q1 356 aaKnown RBP5.54□□□□□ -1.52
PTPN12-209ENST00000460731 FGF22Q9HCT0 170 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 WASH6PQ9NQA3 447 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 SMYD2Q9NRG4 433 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 PHPT1Q9NRX4 125 aaPredicted RBP5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CATSPERZQ9NTU4 200 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 INTS10Q9NVR2 710 aaKnown RBP5.54□□□□□ -1.52
PTPN12-209ENST00000460731 TRNAU1APQ9NX07 287 aaKnown RBP5.54□□□□□ -1.52
PTPN12-209ENST00000460731 EURLQ9NYK6 297 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 NTMQ9P121 344 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 ATXN10Q9UBB4 475 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CD84Q9UIB8 345 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 FBXO5Q9UKT4 447 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CORO1CQ9ULV4 474 aaPredicted RBP5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CHMP2BQ9UQN3 213 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CA5BQ9Y2D0 317 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 ANKRD6Q9Y2G4 727 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 OR1A2Q9Y585 309 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 CSNK1G3Q9Y6M4 447 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 SLC30A1Q9Y6M5 507 aa5.54□□□□□ -1.52
PTPN12-209ENST00000460731 DMXL1Q9Y485 3027 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CFAP54Q96N23 3096 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 LRP4O75096 1905 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 TDRD6O60522 2096 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 A0A1B0GTQ1 180 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PRSS38A1L453 326 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 A6NCN8 305 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 OR51F1A6NGY5 319 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CXorf49A8MYA2 514 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CACNB4O00305 520 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 QSOX1O00391 747 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CDX4O14627 284 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PRMT5O14744 637 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 TPP1O14773 563 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 GPR39O43194 453 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 OR1I1O60431 355 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 GPC4O75487 556 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CDK14O94921 469 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 HAUS5O94927 633 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 SLCO2B1O94956 709 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 NUDT17P0C025 328 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PRSS56P0CW18 603 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 GIMD1P0DJR0 217 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ERVK-10P10266 1014 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ATP1B2P14415 290 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 H2AFXP16104 143 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ZNF8P17098 575 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 HTR1BP28222 390 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 GCAP28676 217 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 STX2P32856 288 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PPARGP37231 505 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 MPLP40238 635 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 POLD2P49005 469 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PRLHRP49683 370 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 HK3P52790 923 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CTSCP53634 463 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PMS2P54278 862 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CSE1LP55060 971 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 SRP54P61011 504 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 IRX4P78413 519 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 TMPRSS15P98073 1019 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 NHLH1Q02575 133 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PDE1CQ14123 709 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 SLC29A2Q14542 456 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 CSRP2Q16527 193 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ALG11Q2TAA5 492 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 KIF19Q2TAC6 998 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 FASTKD1Q53R41 847 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 HSP90AA5PQ58FG0 334 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ZNF789Q5FWF6 425 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 BEND6Q5SZJ8 279 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 UBAP2Q5T6F2 1119 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ALS2CLQ60I27 953 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 METRNLQ641Q3 311 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 RAET1GQ6H3X3 334 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ZNF549Q6P9A3 640 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 LVRNQ6Q4G3 990 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 IL27RAQ6UWB1 636 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ABRAXAS1Q6UWZ7 409 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 KDM7AQ6ZMT4 941 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 MICALCLQ6ZW33 695 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 MARK2Q7KZI7 788 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PTAR1Q7Z6K3 402 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 KCNMB4Q86W47 210 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PARGQ86W56 976 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 ZC3HC1Q86WB0 502 aaKnown RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 C17orf82Q86X59 251 aaPredicted RBP5.53□□□□□ -1.52
PTPN12-209ENST00000460731 TDRPQ86YL5 185 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 PHYKPLQ8IUZ5 450 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 DENND6AQ8IWF6 608 aa5.53□□□□□ -1.52
PTPN12-209ENST00000460731 RBFAQ8N0V3 343 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms