RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 CHRDL2Q6WN34 429 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 RETREG3Q86VR2 466 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 FUNDC1Q8IVP5 155 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 PHACTR4Q8IZ21 702 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 TRAM1L1Q8N609 369 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 OR10Q1Q8NGQ4 319 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 AURKBQ96GD4 344 aaPredicted RBP9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF382Q96SR6 550 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 CCM2Q9BSQ5 444 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 NCOR1O75376 2440 aa9.13□□□□□ -0.95
NUDCD3-203ENST00000460110 VCANP13611 3396 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SAC3D1A6NKF1 404 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ARHGEF33A8MVX0 844 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 FBP2O00757 339 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CSRP3P50461 194 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CLCNKAP51800 687 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CAMK2GQ13555 558 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CST6Q15828 149 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ZDHHC20Q5W0Z9 365 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CYHR1Q6ZMK1 362 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 GCNT7Q6ZNI0 430 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 Q6ZSR9 355 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CYP2U1Q7Z449 544 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 DHFR2Q86XF0 187 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 PLD3Q8IV08 490 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 FAM20CQ8IXL6 584 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 FIG4Q92562 907 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MRPL38Q96DV4 380 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SGK2Q9HBY8 427 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 INTS7Q9NVH2 962 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ATXN10Q9UBB4 475 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SERGEFQ9UGK8 458 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ANAPC1Q9H1A4 1944 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 RNF103-CHMP3A0A140T963 221 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 PRORSD1PA6NEY8 169 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 IFRD1O00458 451 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 KLF8O95600 359 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 RPS3P23396 243 aaKnown RBP eCLIP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 OPRD1P41143 372 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 GRIA2P42262 883 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 RAP1GDS1P52306 607 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ERVK-8P63133 956 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ACSM2AQ08AH3 577 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 CCNIQ14094 377 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MAPKAPK3Q16644 382 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SPANXN4Q5MJ08 99 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 IER5LQ5T953 404 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ACSM2BQ68CK6 577 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SYT12Q8IV01 421 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 HMGB4Q8WW32 186 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 LMLNQ96KR4 655 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 EGLN2Q96KS0 407 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 RIPOR3Q96MK2 946 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 OR52E6Q96RD3 313 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 KCTD14Q9BQ13 255 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF576Q9H609 170 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 XKR8Q9H6D3 395 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ETAA1Q9NY74 926 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 STX18Q9P2W9 335 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 KCNE2Q9Y6J6 123 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 REV3LO60673 3130 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MYLKQ15746 1914 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 KPNA5O15131 536 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 HOXC11O43248 304 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 PEX1O43933 1283 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 TIPRLO75663 272 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 TGFB1P01137 390 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 PDYNP01213 254 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MTTPP55157 894 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 PAGE3Q5JUK9 113 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ADNP2Q6IQ32 1131 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ANKRD54Q6NXT1 300 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 AMZ2Q86W34 360 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 THOC6Q86W42 341 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 DEFB119Q8N690 84 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 FRMD1Q8N878 549 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF483Q8TF39 744 aaPredicted RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 DTD2Q96FN9 168 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 FAM129BQ96TA1 746 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 TMEM79Q9BSE2 394 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MKRN2Q9H000 416 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 C1orf21Q9H246 121 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MRPL40Q9NQ50 206 aaKnown RBP9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 DZANK1Q9NVP4 752 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 SNX6Q9UNH7 406 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 USP22Q9UPT9 525 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 DYRK1BQ9Y463 629 aa9.12□□□□□ -0.95
NUDCD3-203ENST00000460110 MANBAO00462 879 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TRIM38O00635 465 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 FKBP6O75344 327 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 C8GP07360 202 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 FGF4P08620 206 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 ZNF8P17098 575 aaPredicted RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 NELFEP18615 380 aaKnown RBP9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 CLDN2P57739 230 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 TRAF3Q13114 568 aa9.11□□□□□ -0.95
NUDCD3-203ENST00000460110 CYP51A1Q16850 503 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms