RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 KMT5CQ86Y97 462 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 TMEM126BQ8IUX1 230 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 FAM20CQ8IXL6 584 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 SPATA4Q8NEY3 305 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 C1GALT1Q9NS00 363 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 KCND1Q9NSA2 647 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 IRAK4Q9NWZ3 460 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 ZC3H7BQ9UGR2 993 aaKnown RBP18.09■□□□□ 0.49
USP39-209ENST00000458268 FBXO5Q9UKT4 447 aa18.09■□□□□ 0.49
USP39-209ENST00000458268 LOC101059948A0A1B0GTJ6 334 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 TMEM150CB9EJG8 249 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 RAD51CO43502 376 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 HAUS5O94927 633 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 SLCO2B1O94956 709 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 WT1P19544 449 aaPredicted RBP18.08■□□□□ 0.48
USP39-209ENST00000458268 PKLRP30613 574 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 PDIA2Q13087 525 aaKnown RBP18.08■□□□□ 0.48
USP39-209ENST00000458268 CCSMST1Q4G0I0 132 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 ACSBG2Q5FVE4 666 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 PWWP2BQ6NUJ5 590 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 D2HGDHQ8N465 521 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 NDNQ99608 321 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 SLC7A5P2Q9GIP4 190 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.08■□□□□ 0.48
USP39-209ENST00000458268 KLHL20Q9Y2M5 609 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 PCDHGA4Q9Y5G9 962 aa18.08■□□□□ 0.48
USP39-209ENST00000458268 SCRG1O75711 98 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 URI1O94763 535 aaPredicted RBP18.07■□□□□ 0.48
USP39-209ENST00000458268 TTC4O95801 387 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 DLGAP3O95886 979 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 PRKAR1AP10644 381 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 FGF5P12034 268 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 MAP4P27816 1152 aaKnown RBP18.07■□□□□ 0.48
USP39-209ENST00000458268 RAB28P51157 221 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TUBB4BP68371 445 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 CALCOCO2Q13137 446 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TUBB2AQ13885 445 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 KLHL38Q2WGJ6 581 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TTLL9Q3SXZ7 439 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 ZNF549Q6P9A3 640 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 ESX1Q8N693 406 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 GABPB2Q8TAK5 448 aaPredicted RBP18.07■□□□□ 0.48
USP39-209ENST00000458268 CERS2Q96G23 380 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TRAPPC9Q96Q05 1148 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 GPR21Q99679 349 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 SLC30A3Q99726 388 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TUBB2BQ9BVA1 445 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 LATS2Q9NRM7 1088 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 ABCF3Q9NUQ8 709 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 SEMA5BQ9P283 1151 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 TMEM184BQ9Y519 407 aaPredicted RBP18.07■□□□□ 0.48
USP39-209ENST00000458268 SPTBP11277 2137 aa18.07■□□□□ 0.48
USP39-209ENST00000458268 A0A0J9YY10 115 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 VPS26AO75436 327 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 KATNA1O75449 491 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 C1orf105O95561 183 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 SYF2O95926 243 aaKnown RBP18.06■□□□□ 0.48
USP39-209ENST00000458268 PEBP1P30086 187 aaKnown RBP18.06■□□□□ 0.48
USP39-209ENST00000458268 DLSTP36957 453 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 KYNUQ16719 465 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.06■□□□□ 0.48
USP39-209ENST00000458268 PRAMEF17Q5VTA0 474 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 C16orf46Q6P387 395 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 MAATS1Q7Z4T9 603 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 LMNTD2Q8IXW0 634 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 RAB42Q8N4Z0 105 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 C19orf47Q8N9M1 422 aaKnown RBP18.06■□□□□ 0.48
USP39-209ENST00000458268 FBXO36Q8NEA4 188 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 RAD51AP1Q96B01 352 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 OR2A14Q96R47 310 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 UBL7Q96S82 380 aaPredicted RBP18.06■□□□□ 0.48
USP39-209ENST00000458268 NAT9Q9BTE0 207 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 OR6C2Q9NZP2 312 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 BTRCQ9Y297 605 aa18.06■□□□□ 0.48
USP39-209ENST00000458268 MRPS18BQ9Y676 258 aaKnown RBP18.06■□□□□ 0.48
USP39-209ENST00000458268 NBEAQ8NFP9 2946 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 FAM187AA6NFU0 413 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 SMAPO00193 183 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 RASGRF2O14827 1237 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 CCNYL3P0C7X3 344 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 CYP2A7P20853 494 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 CD9P21926 228 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 ADARP55265 1226 aaKnown RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 FASTKD3Q14CZ7 662 aaKnown RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 TRMT10BQ6PF06 316 aaKnown RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 CPNE9Q8IYJ1 553 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 ZBED8Q8IZ13 594 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 GPATCH11Q8N954 259 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 LINC01555Q8NAE3 123 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 OR1L3Q8NH93 324 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 GIMAP7Q8NHV1 300 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 ZNF501Q96CX3 271 aaPredicted RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 CLIP3Q96DZ5 547 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 BBC3Q96PG8 261 aaPredicted RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 ARHGAP9Q9BRR9 750 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 IL17BQ9UHF5 180 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 TRMT6Q9UJA5 497 aaKnown RBP18.05■□□□□ 0.48
USP39-209ENST00000458268 CROTQ9UKG9 612 aa18.05■□□□□ 0.48
USP39-209ENST00000458268 MAGP20916 626 aa18.04■□□□□ 0.48
USP39-209ENST00000458268 SAT1P21673 171 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms