RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 PRMT8Q9NR22 394 aaPredicted RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 FARSBQ9NSD9 589 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 WWOXQ9NZC7 414 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 ARMCX1Q9P291 453 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TBC1D29Q9UFV1 150 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 G3BP2Q9UN86 482 aaKnown RBP8.5□□□□□ -1.05
RIF1-208ENST00000457745 GPR34Q9UPC5 381 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 TRIM33Q9UPN9 1127 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 ARL2BPQ9Y2Y0 163 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 GPSM3Q9Y4H4 160 aa8.5□□□□□ -1.05
RIF1-208ENST00000457745 SPAG17Q6Q759 2223 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 TRBV23OR9-2A0A075B6M9 112 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 A0A1W2PPV9 198 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 H3BM21 787 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 MYO1CO00159 1063 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 CACNB4O00305 520 aaPredicted RBP8.49□□□□□ -1.05
RIF1-208ENST00000457745 FCHO1O14526 889 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 KMOO15229 486 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 SLC16A5O15375 505 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 KATNA1O75449 491 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 RASGRP1O95267 797 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 SLC16A8O95907 504 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 C8GP07360 202 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 HOXC4P09017 264 aaPredicted RBP8.49□□□□□ -1.05
RIF1-208ENST00000457745 T-ENOLP0DO92 83 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 PSMB5P28074 263 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 EPHA3P29320 983 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 AKT2P31751 481 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 CXCL12P48061 93 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 RPIAP49247 311 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 RPL14P50914 215 aaKnown RBP8.49□□□□□ -1.05
RIF1-208ENST00000457745 ARFIP2P53365 341 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 CDKL1Q00532 357 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 DMPKQ09013 629 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 IFT88Q13099 833 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 PRKAA1Q13131 559 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 PRKG2Q13237 762 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 SP140Q13342 867 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 GTF2H2Q13888 395 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 ANKS6Q68DC2 871 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 GTF2H2CQ6P1K8 395 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 RIPOR1Q6ZS17 1223 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 FRA10AC1Q70Z53 315 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 FAM20CQ8IXL6 584 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 OR4F6Q8NGB9 312 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 FBXO27Q8NI29 283 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 ZNF480Q8WV37 535 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 FBXL8Q96CD0 374 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 HSPA12BQ96MM6 686 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 NELL2Q99435 816 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 TIMM29Q9BSF4 260 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 HGH1Q9BTY7 390 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 TRIM55Q9BYV6 548 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 CD244Q9BZW8 370 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 OSGEPL1Q9H4B0 414 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 FSCN3Q9NQT6 498 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 INTS7Q9NVH2 962 aaKnown RBP8.49□□□□□ -1.05
RIF1-208ENST00000457745 ARL8BQ9NVJ2 186 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 DNAJC28Q9NX36 388 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 ARL15Q9NXU5 204 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 HEY2Q9UBP5 337 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 RNF11Q9Y3C5 154 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 DNAJC15Q9Y5T4 150 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 ZDBF2Q9HCK1 2354 aa8.49□□□□□ -1.05
RIF1-208ENST00000457745 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 ATP6AP2A0A1C7CYW4 349 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CCT8L1PA6NM43 557 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SYCE1LA8MT33 242 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 E9PBE3 544 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 PRAMEF26H0Y7S4 382 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 FFAR3O14843 346 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 PIP5K1BO14986 540 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CASC3O15234 703 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 GPR42O15529 346 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 KLHL41O60662 606 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SNX2O60749 519 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 DIAPH2O60879 1101 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 H2AFYO75367 372 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 ATP6AP2O75787 350 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 WDR47O94967 919 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 THEGLP0DJG4 465 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 AOC1P19801 751 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 VARSP26640 1264 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 PEBP1P30086 187 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 GGT5P36269 586 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 HNRNPH2P55795 449 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 SRP54P61011 504 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 TBPL1P62380 186 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CCDC15Q0P6D6 951 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 LCP2Q13094 533 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 C1orf61Q13536 156 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 NAE1Q13564 534 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 COL9A2Q14055 689 aaPredicted RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 RPE65Q16518 533 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 RBBP7Q16576 425 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 LSM12Q3MHD2 195 aaKnown RBP8.48□□□□□ -1.05
RIF1-208ENST00000457745 GALNTL6Q49A17 601 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 CFAP157Q5JU67 520 aa8.48□□□□□ -1.05
RIF1-208ENST00000457745 SULT1C3Q6IMI6 304 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms