RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 DEFB113Q30KQ7 82 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 HENMT1Q5T8I9 393 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 IRAK1BP1Q5VVH5 260 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ATG9BQ674R7 924 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CCDC70Q6NSX1 233 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TRNP1Q6NT89 227 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PHC2Q8IXK0 858 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CCDC89Q8N998 374 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PIH1D2Q8WWB5 315 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SHC3Q92529 594 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PSMF1Q92530 271 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SNX21Q969T3 373 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GAL3ST3Q96A11 431 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CCDC47Q96A33 483 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 AP2M1Q96CW1 435 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 Q96M66 194 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NUDCD1Q96RS6 583 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 WDR24Q96S15 920 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PIP5K1AQ99755 562 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MGME1Q9BQP7 344 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SPATA9Q9BWV2 254 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ACTR5Q9H9F9 607 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FANCEQ9HB96 536 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SLC6A20Q9NP91 592 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ARMCX3Q9UH62 379 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MCM8Q9UJA3 840 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ADAM21Q9UKJ8 722 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NXT1Q9UKK6 140 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MAPK8IP1Q9UQF2 711 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 HPSEQ9Y251 543 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 L3MBTL1Q9Y468 752 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NSD1Q96L73 2696 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SYNJ2BP-COX16A0A087WUM0 186 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 C17orf113A0A1B0GUU1 675 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CCDC78A2IDD5 438 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KLHL33A6NCF5 533 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 VSTM2BA6NLU5 285 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 BECN2A8MW95 431 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 F5H423 210 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FAM72CH0Y354 149 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SRGAP2O75044 1071 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CNOT3O75175 753 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CRLF1O75462 422 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 BMP10O95393 424 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 LSM8O95777 96 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CPP00450 1065 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 HPP00738 406 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TYRP1P17643 537 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 OTX2P32243 289 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 THBS2P35442 1172 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FLT3P36888 993 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CASP2P42575 452 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 HTR3AP46098 478 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GABRA4P48169 554 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PPM1FP49593 454 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PLP2Q04941 152 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GPR18Q14330 331 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 STK38Q15208 465 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CYP2A13Q16696 494 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 KYNUQ16719 465 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM95Q3KNT9 176 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ANKRD39Q53RE8 183 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FAM72AQ5TYM5 149 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 YOD1Q5VVQ6 348 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FAAH2Q6GMR7 532 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM211Q6ICI0 200 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FAM72DQ6L9T8 149 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 USP45Q70EL2 814 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 STK32CQ86UX6 486 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FAM72BQ86X60 149 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 C1QL4Q86Z23 238 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SIAH3Q8IW03 269 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ARHGEF19Q8IW93 802 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CEP57L1Q8IYX8 460 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 NDUFAF2Q8N183 169 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PPM1KQ8N3J5 372 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CPSF7Q8N684 471 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 OR1L3Q8NH93 324 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SVIPQ8NHG7 77 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ENOX1Q8TC92 643 aaKnown RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GPT2Q8TD30 523 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 CHAC2Q8WUX2 184 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TMEM158Q8WZ71 300 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 FATE1Q969F0 183 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ANAPC16Q96DE5 110 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 ELMO2Q96JJ3 720 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 PWWP2AQ96N64 755 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MAP3K3Q99759 626 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 SYT3Q9BQG1 590 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MENTQ9BUN1 341 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MLPHQ9BV36 600 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 AP1M1Q9BXS5 423 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 MMRN2Q9H8L6 949 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 TRIM39Q9HCM9 518 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 RASSF1Q9NS23 344 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 IL17CQ9P0M4 197 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 COX16Q9P0S2 106 aa2.04□□□□□ -2.08
NEDD1-204ENST00000457368 AJAP1Q9UKB5 411 aaPredicted RBP2.04□□□□□ -2.08
NEDD1-204ENST00000457368 POMT2Q9UKY4 750 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms