RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IMPDH2P12268 514 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 BCKDHAP12694 445 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 PFKLP17858 780 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 PPM1AP35813 382 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 ADARB1P78563 741 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 CYP4F3Q08477 520 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 RUNDC3AQ59EK9 446 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 ZNF786Q8N393 782 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 ITFG1Q8TB96 612 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 MAGEE2Q8TD90 523 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 VPS50Q96JG6 964 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 TMEM106CQ9BVX2 250 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 CEP44Q9C0F1 390 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 IKZF5Q9H5V7 419 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 C11orf49Q9H6J7 331 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 BRD9Q9H8M2 597 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 TMEM39AQ9NV64 488 aa17.95■□□□□ 0.46
SEMA3B-209ENST00000456560 A0A087WXM4 84 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 TRBV5-3A0A0A0MS03 114 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 GRM6O15303 877 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 NUAK1O60285 661 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 KRT6AP02538 564 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 KRT6BP04259 564 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 PGRP06401 933 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 OR56A5P0C7T3 313 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 KRT6CP48668 564 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 SPINT3P49223 89 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 WDR5P61964 334 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ZDHHC20Q5W0Z9 365 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 UBE2R2Q712K3 238 aaPredicted RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 LRRC70Q7Z2Q7 622 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 KLHL23Q8NBE8 558 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ZNF548Q8NEK5 533 aaPredicted RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 OR2T12Q8NG77 320 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ACPTQ9BZG2 426 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ZDHHC6Q9H6R6 413 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 PARVBQ9HBI1 364 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 B4GALT6Q9UBX8 382 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 PDYNP01213 254 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 C8AP07357 584 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 C8GP07360 202 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 SLC6A12P48065 614 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ESRRGP62508 458 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 GGTA1PQ4G0N0 100 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 GPR141Q7Z602 305 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 PATL1Q86TB9 770 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 TRIM74Q86UV6 250 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 TRIM73Q86UV7 250 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 RBM12BQ8IXT5 1001 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 TCAIMQ8N3R3 496 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 SNRNP27Q8WVK2 155 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ASB11Q8WXH4 323 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 MTFMTQ96DP5 389 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 ACTR8Q9H981 624 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 CARS2Q9HA77 564 aaKnown RBP17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 SLCO3A1Q9UIG8 710 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 PCDHGA11Q9Y5H2 935 aa17.94■□□□□ 0.46
SEMA3B-209ENST00000456560 H0Y858 1186 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 AREL1O15033 823 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 FGF18O76093 207 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 SNAP29O95721 258 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CLIC3O95833 236 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 UGT2B4P06133 528 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 HNRNPCP07910 306 aaKnown RBP eCLIP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 MPC1LP0DKB6 136 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 NFKBIAP25963 317 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 STT3AP46977 705 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CPSF6Q16630 551 aaKnown RBP eCLIP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 FAM98BQ52LJ0 330 aaKnown RBP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CCDC149Q6ZUS6 474 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 TMEM25Q86YD3 366 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CLVS1Q8IUQ0 354 aaPredicted RBP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 PLPP6Q8IY26 295 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 LEMD2Q8NC56 503 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CHST14Q8NCH0 376 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 OR10A6Q8NH74 314 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 FNDC8Q8TC99 324 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 SLC22A17Q8WUG5 538 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CORO1BQ9BR76 489 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 THUMPD3Q9BV44 507 aaKnown RBP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 SLC25A13Q9UJS0 675 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 CCL26Q9Y258 94 aa17.93■□□□□ 0.46
SEMA3B-209ENST00000456560 DEAF1O75398 565 aaPredicted RBP17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 EN2P19622 333 aaPredicted RBP17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 CA8P35219 290 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 CLDN8P56748 225 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 NUP107P57740 925 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 PHC1P78364 1004 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 CHRNB3Q05901 458 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 DUS1LQ6P1R4 473 aaKnown RBP17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 ABRAXAS1Q6UWZ7 409 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 VRK3Q8IV63 474 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 CROCCP3Q8IVE0 287 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 OR52E4Q8NGH9 312 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 SH3GL1Q99961 368 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 DLGAP4Q9Y2H0 992 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 HELZP42694 1942 aaKnown RBP17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 H0YAE9 185 aa17.92■□□□□ 0.46
SEMA3B-209ENST00000456560 ZSCAN9O15535 394 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms